Factsheet for Bra040682.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001190.1-P
Bra004106.1-P
Bra005050.1-P
Bra005052.1-P
Bra012970.1-P
Bra012971.1-P
Bra017081.1-P
Bra020761.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G19560.1	Bra005050.1-P	AT2G39340.1	19843313
AT2G19560.1	Bra005052.1-P	AT2G39340.1	19843313
AT2G19560.1	Bra017081.1-P	AT2G39340.1	19843313
AT2G19560.1	Bra001190.1-P	AT3G06290.1	19843313
AT2G19560.1	Bra020761.1-P	AT3G06290.1	19843313
AT2G19560.1	Bra004106.1-P	AT5G45010.1	19843313
AT2G19560.1	Bra012970.1-P	AT5G61290.1	19843313
AT2G19560.1	Bra012971.1-P	AT5G61290.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35873	Canola	cytosol	99.76	99.76
AT2G19560.1	Thale cress	cytosol	94.67	94.67
VIT_11s0016g02290.t01	Wine grape	cytosol	81.11	81.11
KRH02720	Soybean	cytosol, nucleus	80.39	80.39
KRH19149	Soybean	cytosol, nucleus	79.42	80.0
PGSC0003DMT400034206	Potato	cytosol	77.97	77.59
Solyc07g039210.2.1	Tomato	nucleus	77.24	76.87
PGSC0003DMT400056705	Potato	cytosol	31.72	73.6
GSMUA_Achr7P18480_001	Banana	cytosol	72.88	72.88
EER98853	Sorghum	cytosol	66.34	66.99
Os09t0386400-01	Rice	cytosol	65.86	66.5
TraesCS5D01G207800.1	Wheat	cytosol	65.38	66.01
TraesCS5A01G201500.1	Wheat	cytosol	65.13	65.77
TraesCS5B01G200200.1	Wheat	cytosol	65.13	65.77
HORVU5Hr1G059930.4	Barley	cytosol	64.89	65.53
Zm00001d020359_P003	Maize	cytosol	65.62	63.32

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.25.40.570	MapMan:16.11.2.2	EnsemblPlantsGene:Bra040682	EnsemblPlants:Bra040682.1	EnsemblPlants:Bra040682.1-P
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006810	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009723
GO:GO:0009873	GO:GO:0009987	GO:GO:0016973	GO:GO:0048364	GO:GO:0060968	InterPro:IPR000717
InterPro:IPR036388	UniProt:M4FHV3	InterPro:PCI_dom	PFAM:PF01399	PFscan:PS50250	PANTHER:PTHR12732
PANTHER:PTHR12732:SF0	UniParc:UPI000253E76F	InterPro:WH-like_DNA-bd_sf	SEG:seg	:	:

Description

AT2G19560 (E=1e-215) EER5 | EER5 (ENHANCED ETHYLENE RESPONSE 5)

Coordinates

chrScaffold000232:-:58632..61688

Molecular Weight (calculated)

47653.3 Da

IEP (calculated)

9.554

GRAVY (calculated)

-0.124

Length

413 amino acids

Sequence
(BLAST)

001: MAYVSMGEAH RRITEYLNRF CDAVSYQDSS MLCRLLSFSS NSPSLLSLAD ALNVFQDASS LIRQSDKFSE YGEILAHLFR SLQSYRVGNL VEAYLAFEKF
101: ANAFVQEFRN WESAWALEAL YVVCYEVRIL AEKADKELTS NGKSPEKLKA AGSLLMKVFG VLAGKGPKRV GALYVTCQLF KTYFKLGTVN LCRSVIRSIE
201: TARIFDFEEF PRRDKVTYMY YTGRLEVFNE NFPAADTKLS YALQHCNPKR ERNIRMILKY LIPVKLSLGV IPKDELLQKY NLHEYMNVVQ ALRKGDLRLL
301: RHALQEHEDR FLRSGVYLVL EKLELQVYQR LMKKIYIIQK LSDPARAHQL KLEVIAKALR WLEIDMDLDE VECIMTILIY KNLVKGYLAH KSKVVVLSKQ
401: DPFPKLNGKP VGS

Best Arabidopsis Sequence Match ( AT2G19560.1 )
(BLAST)

001: MAYVSMGEAH RRITEYLNRF CDAVSYQDSS TLCRLLSFSS NSPPLLSLAD ALNVFQDSSS LIRQSDRFSE YGEILAHVFR SLQSYRVGNL VEAYLAFDKF
101: ANAFVQEFRN WESAWALEAL YVVCYEIRVL AEKADKDLTS NGKSPEKLKA AGSLLMKVFG VLAGKGPKRV GALYVTCQLF KTYFKLGTVN LCRSVIRSIE
201: TARIFDFEEF PRRDKVTYMY YTGRLEVFNE NFPAADTKLS YALQNCNPKR ERNIRMILKY LVPVKLSLGI IPKDELLRNY NLHEYTKIVQ ALRKGDLRLL
301: RHALQEHEDR FLRSGVYLVL EKLELQVYQR LMKKIYINQK LSDPARAHQL KLEGIAKALR WLDMDMDLDE VECIMTILIY KNLVKGYLAH KSKVVVLSKQ
401: DPFPKLNGKP VSS

Arabidopsis Description

EER5Enhanced ethylene response protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.