Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400034206 | Potato | cytosol | 96.87 | 96.87 |
| PGSC0003DMT400056705 | Potato | cytosol | 39.28 | 91.57 |
| VIT_11s0016g02290.t01 | Wine grape | cytosol | 80.72 | 81.11 |
| KRH19149 | Soybean | cytosol, nucleus | 79.04 | 80.0 |
| CDY67021 | Canola | cytosol | 68.19 | 78.83 |
| KRH02720 | Soybean | cytosol, nucleus | 78.31 | 78.69 |
| CDY66989 | Canola | cytosol | 67.95 | 78.33 |
| Bra040682.1-P | Field mustard | cytosol | 76.87 | 77.24 |
| CDY35873 | Canola | cytosol | 76.87 | 77.24 |
| AT2G19560.1 | Thale cress | cytosol | 74.94 | 75.3 |
| GSMUA_Achr7P18480_001 | Banana | cytosol | 73.49 | 73.85 |
| Os09t0386400-01 | Rice | cytosol | 67.71 | 68.7 |
| EER98853 | Sorghum | cytosol | 66.99 | 67.97 |
| TraesCS5A01G201500.1 | Wheat | cytosol | 65.78 | 66.75 |
| TraesCS5D01G207800.1 | Wheat | cytosol | 65.54 | 66.5 |
| HORVU5Hr1G059930.4 | Barley | cytosol | 65.3 | 66.26 |
| TraesCS5B01G200200.1 | Wheat | cytosol | 65.3 | 66.26 |
| CDY13554 | Canola | cytosol | 27.47 | 65.9 |
| Zm00001d020359_P003 | Maize | cytosol | 66.99 | 64.95 |
| CDY13555 | Canola | cytosol, nucleus, vacuole | 18.07 | 39.06 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.25.40.570 | MapMan:16.11.2.2 | ncoils:Coil | GO:GO:0000973 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003690 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005643 | GO:GO:0006139 |
| GO:GO:0006368 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009873 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016973 | GO:GO:0035327 | GO:GO:0048364 | GO:GO:0060968 |
| GO:GO:0070390 | GO:GO:0071033 | InterPro:IPR000717 | InterPro:IPR036388 | UniProt:K4CDP7 | InterPro:PCI_dom |
| PFAM:PF01399 | PFscan:PS50250 | PANTHER:PTHR12732 | PANTHER:PTHR12732:SF0 | EnsemblPlantsGene:Solyc07g039210.2 | EnsemblPlants:Solyc07g039210.2.1 |
| UniParc:UPI000276B426 | InterPro:WH-like_DNA-bd_sf | SEG:seg | : | : | : |
Description
Enhanced ethylene response protein 5 [Source:Projected from Arabidopsis thaliana (AT2G19560) UniProtKB/Swiss-Prot;Acc:Q8GWE6]
Coordinates
chr7:-:45600502..45606610
Molecular Weight (calculated)
47840.3 Da
IEP (calculated)
9.795
GRAVY (calculated)
-0.133
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAYLSMGE AHRRITDFLN RFSDAVSSQD AKSLCLIFSI SSNSSFLLSL SDALITFQDA SRVMRQTDRY SQYADILLPL FRALHSYRLK NLVESYQAFE
101: KAANAFTQEF RNWESAWALE ALYVIAYETR ILAERADREL ASNGKTPEKL KGAGSFLMKV FGVLAGKGSK RVGALYVTCQ LFKIYFKLGT VHLCKSVTRS
201: IETARIFDFE EFPLRDKVTY MYYTGRLEVY NENFSAADHK LSYALSHCNP RKERNIRMIL KYLIPVKLSI GILPKTSLLE KYNLTEYNNI VLALRRGDLR
301: LLQGALQEHE DQFLRSGVYL VLEKLELQVY QRLLKKIYIF QKQKDPNKAH QIKLDLIVRA LKWLEIDMDV DEVECVMSIL IYKNLIKGYF AHKSKVVVLS
401: KQDPFPRLTG KAINS
101: KAANAFTQEF RNWESAWALE ALYVIAYETR ILAERADREL ASNGKTPEKL KGAGSFLMKV FGVLAGKGSK RVGALYVTCQ LFKIYFKLGT VHLCKSVTRS
201: IETARIFDFE EFPLRDKVTY MYYTGRLEVY NENFSAADHK LSYALSHCNP RKERNIRMIL KYLIPVKLSI GILPKTSLLE KYNLTEYNNI VLALRRGDLR
301: LLQGALQEHE DQFLRSGVYL VLEKLELQVY QRLLKKIYIF QKQKDPNKAH QIKLDLIVRA LKWLEIDMDV DEVECVMSIL IYKNLIKGYF AHKSKVVVLS
401: KQDPFPRLTG KAINS
001: MAYVSMGEAH RRITEYLNRF CDAVSYQDSS TLCRLLSFSS NSPPLLSLAD ALNVFQDSSS LIRQSDRFSE YGEILAHVFR SLQSYRVGNL VEAYLAFDKF
101: ANAFVQEFRN WESAWALEAL YVVCYEIRVL AEKADKDLTS NGKSPEKLKA AGSLLMKVFG VLAGKGPKRV GALYVTCQLF KTYFKLGTVN LCRSVIRSIE
201: TARIFDFEEF PRRDKVTYMY YTGRLEVFNE NFPAADTKLS YALQNCNPKR ERNIRMILKY LVPVKLSLGI IPKDELLRNY NLHEYTKIVQ ALRKGDLRLL
301: RHALQEHEDR FLRSGVYLVL EKLELQVYQR LMKKIYINQK LSDPARAHQL KLEGIAKALR WLDMDMDLDE VECIMTILIY KNLVKGYLAH KSKVVVLSKQ
401: DPFPKLNGKP VSS
101: ANAFVQEFRN WESAWALEAL YVVCYEIRVL AEKADKDLTS NGKSPEKLKA AGSLLMKVFG VLAGKGPKRV GALYVTCQLF KTYFKLGTVN LCRSVIRSIE
201: TARIFDFEEF PRRDKVTYMY YTGRLEVFNE NFPAADTKLS YALQNCNPKR ERNIRMILKY LVPVKLSLGI IPKDELLRNY NLHEYTKIVQ ALRKGDLRLL
301: RHALQEHEDR FLRSGVYLVL EKLELQVYQR LMKKIYINQK LSDPARAHQL KLEGIAKALR WLDMDMDLDE VECIMTILIY KNLVKGYLAH KSKVVVLSKQ
401: DPFPKLNGKP VSS
Arabidopsis Description
EER5Enhanced ethylene response protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWE6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.