Factsheet for HORVU4Hr1G089360.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	peroxisome
MultiLoc:	peroxisome
YLoc:	cytosol

cytosol: 10937693
nucleus: 10937693

gfp PMID: 10937693

R Itai, K Suzuki, H Yamaguchi, H Nakanishi, NK Nishizawa, E Yoshimura, S Mori

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G059930.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	HORVU5Hr1G059930.4	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G522900.1	Wheat	cytosol	82.55	84.71
TraesCSU01G032200.1	Wheat	peroxisome	79.02	83.96
HORVU5Hr1G078450.1	Barley	cytosol	35.88	65.36
Os07t0112100-00	Rice	cytosol	60.2	60.2
TraesCS7D01G425900.1	Wheat	cytosol	55.69	58.32
HORVU4Hr1G072260.1	Barley	cytosol	56.86	57.77
Os02t0580600-01	Rice	cytosol	50.78	55.22
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	45.29	50.77
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	45.29	50.77
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	44.9	50.44
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	43.73	49.23
Bra012970.1-P	Field mustard	cytosol	43.14	49.22
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	10.98	49.12
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	43.53	49.01
Bra012971.1-P	Field mustard	cytosol	44.12	48.91
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	43.92	48.8
CDY23071	Canola	cytosol	44.12	48.7
CDY40773	Canola	mitochondrion	43.73	48.58
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	43.73	48.37
Bra028683.1-P	Field mustard	mitochondrion	43.53	48.37
CDY02157	Canola	cytosol	43.73	48.27
AT5G07800.1	Thale cress	cytosol	43.33	48.04
AT5G61290.1	Thale cress	cytosol	43.14	47.72
CDY02158	Canola	cytosol	37.06	47.13
CDY23072	Canola	cytosol	36.67	46.63
HORVU6Hr1G029800.7	Barley	mitochondrion	34.31	42.27
HORVU6Hr1G061340.1	Barley	mitochondrion	15.88	41.75
HORVU2Hr1G026400.29	Barley	cytosol	11.18	41.61
HORVU1Hr1G091130.12	Barley	cytosol, mitochondrion, peroxisome, plastid	37.65	40.76
HORVU4Hr1G087900.7	Barley	cytosol, peroxisome	30.98	40.72
HORVU1Hr1G053900.1	Barley	cytosol, peroxisome	37.84	39.63
HORVU4Hr1G031220.3	Barley	mitochondrion, peroxisome	17.45	33.84
HORVU6Hr1G094480.7	Barley	plastid	22.75	32.31
HORVU7Hr1G027520.8	Barley	endoplasmic reticulum, extracellular, golgi	19.61	31.95
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	46.47	22.23

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	UniProt:A0A287Q3D7	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114
EnsemblPlantsGene:HORVU4Hr1G089360	EnsemblPlants:HORVU4Hr1G089360.1	InterPro:IPR036188	PFAM:PF00743	PRINTS:PR00370	PANTHER:PTHR23023
PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	UniParc:UPI000B467EA4	SEG:seg	:	:

Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A287Q3D7]

Coordinates

chrchr4H:-:642223610..642225409

Molecular Weight (calculated)

55881.1 Da

IEP (calculated)

5.841

GRAVY (calculated)

-0.277

Length

510 amino acids

Sequence
(BLAST)

001: RPTKVTEESR ASTVDQPIGV GMAAGDGEPA LQSKSVCVVG GGVAGLAAAR ELRREGHAVT VMEQSGDVGG QWLYDPLTDG EDPLGAAAPV RVPSSIYACL
101: RLISPREAMG FSDFQFLPRE GAGRDPRRFP AHRELHCYLR DFCDAFGLMD VVRLNTRVLH VAPATTATRQ WTVRSVRLLG STEDDESREK EEVFDAVVVA
201: NGHHSQPMLP TDIQGMGEWT RRQLHSHSYR TPEPFRGEAV VVAGCGDSGK DIALDLCRVA REVHLAASSE ATAATPDVSR MLANHGDVLR LHTRIRRLHA
301: DGRVEFADGS SVVADTVIYC TGYTYSFPFL DTGGAVTVDS DGYVVGPLFE HVFPPSLSFV GVVRKVLIPW FFEVQARWVA QVLSGRKTLP AEEEMVRSVE
401: EHLRAREAAG VPWKHTHNIG GIDPQKMYEL GEKYSDLAPV EEWKKELVMS SIASKMADVE TFRDRADDSE NVRKGVQAWL DLKLAAQPRA KSMSTVADDV
501: EADARAMPHA

Best Arabidopsis Sequence Match ( AT5G61290.1 )
(BLAST)

001: MVLVITEPIK SQSKTVCVIG AGPSGLVSAR ELKKEGHKVV VMEQNHDVGG QWLYQPNVDE EDTLGKTKTL KVHSSVYSSL RLASPREVMG FSDFPFIAKE
101: GRDSRRFPGH EELLLYLKDF CQVFGLREMI RFNVRVEFVG MVNEDDDDDD DVKKWMVKSV KKSGEVMEEV FDAVVVASGH YSYPRLPTIK GMDLWKRKQL
201: HSHIYRVPEP FCDEVVVVVG CSMSGQDISI ELVEVAKEVH LSTKSLDIPP GLSKVIEKHQ NLHLHPQIES LEEDGRVIFE DGSCIVADTI LYCTGYEYKF
301: PFLESKGRVE IDDNRVGPLF EHTFSPSLSP FLSFVGIPRK LIGFPFFESQ AKWIAKLLSG KTSLPSSDQM MQSISDFYLA READGIPKRN THDIADFNYS
401: DKYADYIGFP HLEEWRKVLC LSAILNSIEN LETYRDSWDD DDLLQETLQD PYFTQLSIPS V

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.