Factsheet for VIT_17s0000g06780.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
peroxisome 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_11s0016g02290.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	VIT_11s0016g02290.t01	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	37.8	88.77
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	33.21	77.8
KRH63273	Soybean	cytosol, peroxisome, plastid	33.02	76.69
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	32.65	76.48
KRH54615	Soybean	cytosol	22.23	75.24
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	31.52	74.17
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	31.24	73.51
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	31.52	72.89
CDY40773	Canola	mitochondrion	31.24	72.55
Bra028683.1-P	Field mustard	mitochondrion	31.14	72.33
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	31.14	72.33
AT5G07800.1	Thale cress	cytosol	31.05	71.96
Bra012971.1-P	Field mustard	cytosol	30.68	71.09
CDY02158	Canola	cytosol	26.64	70.82
AT5G61290.1	Thale cress	cytosol	30.49	70.5
CDY23072	Canola	cytosol	26.45	70.32
KRH56869	Soybean	cytosol	29.93	69.2
Bra012970.1-P	Field mustard	cytosol	28.99	69.13
KRH56870	Soybean	cytosol, nucleus, peroxisome	29.55	68.93
CDY02157	Canola	cytosol	29.36	67.75
CDY23071	Canola	cytosol	29.08	67.1
KRH56868	Soybean	cytosol, peroxisome, plastid	22.05	63.51
VIT_00s0233g00120.t01	Wine grape	cytosol, peroxisome, vacuole	6.85	59.35
TraesCS1B01G006000.1	Wheat	mitochondrion	21.58	56.93
TraesCS6A01G150700.1	Wheat	cytosol	21.58	55.16
TraesCS1B01G006200.1	Wheat	cytosol	22.42	53.59
OQU88310	Sorghum	cytosol, mitochondrion	21.2	53.18
TraesCS6A01G120500.2	Wheat	cytosol	23.83	52.7
TraesCS6D01G110500.1	Wheat	cytosol	23.55	52.62
TraesCS6B01G178800.1	Wheat	cytosol	23.83	52.37
TraesCSU01G030500.1	Wheat	cytosol	20.92	52.35
Os07t0111700-01	Rice	cytosol, peroxisome	22.61	51.61
Os07t0112000-00	Rice	cytosol	22.98	51.15
TraesCS4B01G269700.1	Wheat	cytosol	23.73	51.11
Os07t0111900-00	Rice	extracellular	22.8	51.05
TraesCS5B01G194300.1	Wheat	cytosol	22.7	50.95
TraesCS4D01G269000.1	Wheat	cytosol	23.73	50.91
VIT_00s0233g00180.t01	Wine grape	cytosol	21.76	50.77
EER97845	Sorghum	cytosol	20.07	50.71
VIT_00s0233g00130.t01	Wine grape	plastid	10.04	50.71
VIT_02s0154g00190.t01	Wine grape	cytosol	21.67	50.55
Zm00001d018650_P001	Maize	cytosol	21.95	50.54
EER95747	Sorghum	cytosol	22.33	50.32
TraesCS7D01G425900.1	Wheat	cytosol	22.89	50.1
Zm00001d018652_P001	Maize	endoplasmic reticulum	22.14	49.48
Os07t0112100-00	Rice	cytosol	23.64	49.41
HORVU4Hr1G072260.1	Barley	cytosol	23.26	49.4
TraesCS6D01G110300.1	Wheat	cytosol	23.26	49.3
HORVU5Hr1G078450.1	Barley	cytosol	12.95	49.29
TraesCS3A01G010900.1	Wheat	cytosol	23.08	49.0
VIT_02s0154g00170.t01	Wine grape	vacuole	20.64	48.78
Zm00001d018648_P001	Maize	cytosol	22.7	48.59
TraesCS6B01G148900.1	Wheat	cytosol	23.26	48.44
VIT_02s0154g00180.t01	Wine grape	cytosol, peroxisome, vacuole	20.64	48.35
TraesCS5A01G522900.1	Wheat	cytosol	22.51	48.29
Os02t0580600-01	Rice	cytosol	21.11	47.97
TraesCSU01G033300.1	Wheat	cytosol	21.86	47.94
TraesCSU01G032200.1	Wheat	peroxisome	21.48	47.71
TraesCS3D01G000800.1	Wheat	cytosol	23.08	47.67
TraesCS3B01G014100.2	Wheat	cytosol	23.08	47.49
TraesCSU01G045200.2	Wheat	cytosol	23.08	47.49
TraesCS5B01G531000.1	Wheat	cytosol	22.05	47.47
Os06t0528700-01	Rice	plasma membrane	21.58	47.42
TraesCS5A01G298300.1	Wheat	cytosol	21.76	47.25
Os01t0368000-00	Rice	cytosol	20.26	47.16
TraesCSU01G087500.1	Wheat	cytosol	23.36	46.72
HORVU4Hr1G089360.1	Barley	cytosol	22.23	46.47
TraesCSU01G033200.1	Wheat	cytosol	11.54	46.24
VIT_02s0154g00160.t01	Wine grape	cytosol, peroxisome	18.86	45.89
Zm00001d018649_P001	Maize	cytosol	20.73	45.85
TraesCS5B01G297400.1	Wheat	cytosol	19.79	45.67
TraesCS5B01G530900.1	Wheat	cytosol	22.05	45.37
VIT_18s0075g00690.t01	Wine grape	cytosol	4.22	44.12
VIT_00s0233g00170.t01	Wine grape	cytosol	10.13	43.2
VIT_13s0019g00620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.29	42.76
VIT_13s0019g00660.t01	Wine grape	mitochondrion	18.39	42.7
VIT_00s0131g00120.t01	Wine grape	cytosol	9.1	37.16

Protein Annotations

EntrezGene:100248548	wikigene:100248548	Gene3D:3.50.50.60	MapMan:35.1	EMBL:AM448978	ProteinID:CAN76524
ProteinID:CAN76524.1	ProteinID:CCB43061	ProteinID:CCB43061.1	UniProt:F6GT52	InterPro:FAD/NAD-bd_sf	EMBL:FN594950
InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	EntrezGene:LOC100248548	wikigene:LOC100248548	PFAM:PF00743
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	UniParc:UPI0002109779	ArrayExpress:VIT_17s0000g06780
EnsemblPlantsGene:VIT_17s0000g06780	EnsemblPlants:VIT_17s0000g06780.t01	RefSeq:XP_002281477	RefSeq:XP_002281477.1	:	:

Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:F6GT52]

Coordinates

chr17:-:7387424..7411694

Molecular Weight (calculated)

121880.0 Da

IEP (calculated)

6.374

GRAVY (calculated)

-0.235

Length

1066 amino acids

Sequence
(BLAST)

0001: MVSERIQSKH VCVIGAGPSG LVAARELRKE GHSVVVMEQN HDIGGQWLYE PKVEGEDALG KSTFLKVHSS VYDSLRLFSP REIMGFSDFP FVVKKGRDMR
0101: RFPGHRELLL YLQDFCEWFG LREMMRFKTR VEYVGMLDSD QVGRDLKWVV ESRDMESEKV SEEVFDAVVV ATGHYSKPRL PSIKGMDVWK RKQMHSHMYR
0201: VPEPFRHEVV VIVGNSHSGE DVSIGLVEVA KEIHLSFKSL DLSEGLSKFI SKHHNLHLHL QIESLHEDGR VVFVDGSWVM ADTIIYCTGY SYSFPFLDTK
0301: GIVVVDDNRV GPLYEHTFPP LLAPSLSFVG IPRKIIAFPF FESQAIWIAQ LLSGKKTLPS FHDMMHSIED FYRSREIAGI PKRYTHELAD FEYCDKYGDN
0401: VGFPHLEEWR KGLCVSAVLK AMANLETFRD SGDEDELLQV ALQSPHFTQF PQSPKFLKVH SSIYASLRLA SPREIVGFSD FPFVVKKGRD TRRFPGHREL
0501: LWYLEDFCEW FGLRETIRFN TKVEYVGMLD SDEVGGGLKW VVRSRDVKSE KVVEELFDAV VVATGQYSHP RLPSIKGMEA WKRKQMHSHI YRVPHPFHNE
0601: VVVVVGNAAS GQDISIELVD VAKEIHLSAK SLDISEGLSR IISKHHNLHL HLQIESLHED GRVVFVDGSW VVADTIIYCT GYSYSFPFLD TKGIVAVDDD
0701: RVGPLYEHTF PPSLAPSLSF VGIPRKILGF PFFESQAMWI AQLLSGRKTL PSFHDMMRSI EDFYQSRDAA GIPKHQTHDI ADFEYFDKYG DNVGFPHTEE
0801: WRKKLLLSTV GNAQVNLETY RDSWYDHELL QVVLQSPLFT QSLQSPSQHL TGLSKVISKL HNLHLHLQIE SLHEDGRVVF VDGSWVLADT IIYCTGYSYA
0901: FPFLDTKGIV AVDDDRVGPL YEHTFPPSLA PSLSFVGIPR KIIGFPFFES QAIWIAQLLS GRKTLPSFHE MMQSIEDFYQ SRDAAGIPKH HTHDIADFEY
1001: RDKYLDNVGF PHLEEWRKEL ILSGIGNAQV NLETYRDAWD DHELLQVALQ SPHFTQSLQS PSQHFP

Best Arabidopsis Sequence Match ( AT5G07800.1 )
(BLAST)

001: MVTFTSEASR SRSKKVCVIG AGPAGLVSAR ELRKEGHKVV VLEQNEDVGG QWFYQPNVEE EDPLGRSSGS INGELKVHSS IYSSLRLTSP REIMGYSDFP
101: FLAKKGRDMR RFPGHKELWL YLKDFSEAFG LREMIRFNVR VEFVGEKEEE DDVKKWIVRS REKFSGKVME EIFDAVVVAT GHYSHPRLPS IKGMDSWKRK
201: QIHSHVYRVP DPFRNEVVVV VGNSMSGQDI SMELVEVAKE VHLSAKTLDI SSGLSKVISK HPNLLIHPQI ESLEDDGKVI FVDGSWVVAD TILYCTGYSY
301: KFPFLESKGR IEVDDDRVGP LFEHTFPPCL SPSLSFVGIP RKLIGFPFFE AQAKWIAQVL SGKSSLPSPD QMLQSVDEFY RSRDLAGVPK HNTHDIADFT
401: YCDKYADYVG FPHLEDWRKL LCLSALNNSQ ENLETYRDSW DDHELLQEAL QSSHFTNFNS

Arabidopsis Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.