Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS5A01G201500.1 | |
| TraesCS5B01G200200.1 | |
| TraesCS5D01G207800.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61290.1 | TraesCS5A01G201500.1 | AT2G19560.1 | 19843313 |
| AT5G61290.1 | TraesCS5B01G200200.1 | AT2G19560.1 | 19843313 |
| AT5G61290.1 | TraesCS5D01G207800.1 | AT2G19560.1 | 19843313 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G032200.1 | Wheat | peroxisome | 83.8 | 74.38 |
| TraesCSU01G033300.1 | Wheat | cytosol | 82.86 | 72.63 |
| TraesCSU01G033200.1 | Wheat | cytosol | 41.31 | 66.17 |
| Os07t0112100-00 | Rice | cytosol | 69.25 | 57.84 |
| TraesCS7D01G425900.1 | Wheat | cytosol | 64.32 | 56.26 |
| TraesCSU01G045200.2 | Wheat | cytosol | 63.85 | 52.51 |
| Os02t0580600-01 | Rice | cytosol | 57.51 | 52.24 |
| TraesCSU01G087500.1 | Wheat | cytosol | 62.44 | 49.91 |
| Solyc03g115560.2.1 | Tomato | cytosol, peroxisome, plastid | 52.58 | 49.23 |
| PGSC0003DMT400063125 | Potato | cytosol, peroxisome, plastid | 52.35 | 49.01 |
| VIT_17s0000g06790.t01 | Wine grape | cytosol, peroxisome, plastid | 51.41 | 48.24 |
| CDY14028 | Canola | cytosol, mitochondrion, peroxisome, plastid | 51.64 | 47.93 |
| Bra012970.1-P | Field mustard | cytosol | 50.23 | 47.87 |
| CDX99030 | Canola | cytosol, mitochondrion, peroxisome, plastid | 50.47 | 47.46 |
| CDY23071 | Canola | cytosol | 51.41 | 47.4 |
| CDY40773 | Canola | mitochondrion | 50.94 | 47.28 |
| CDX69991 | Canola | cytosol, mitochondrion, peroxisome, plastid | 50.23 | 47.24 |
| Bra028683.1-P | Field mustard | mitochondrion | 50.7 | 47.06 |
| CDY02157 | Canola | cytosol | 50.94 | 46.97 |
| Bra012971.1-P | Field mustard | cytosol | 50.47 | 46.74 |
| Bra009308.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 50.47 | 46.64 |
| AT5G07800.1 | Thale cress | cytosol | 50.23 | 46.52 |
| KRH55196 | Soybean | cytosol, mitochondrion, peroxisome | 12.44 | 46.49 |
| AT5G61290.1 | Thale cress | cytosol | 49.53 | 45.77 |
| CDY02158 | Canola | cytosol | 42.49 | 45.14 |
| CDY23072 | Canola | cytosol | 42.02 | 44.64 |
| VIT_17s0000g06780.t01 | Wine grape | cytosol, peroxisome, plastid | 52.35 | 20.92 |
Protein Annotations
| Gene3D:3.50.50.60 | MapMan:35.1 | InterPro:FAD/NAD-bd_sf | InterPro:Flavin_mOase | InterPro:Flavin_mOase-like | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004499 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0050660 | GO:GO:0050661 | GO:GO:0055114 | InterPro:IPR036188 | PFAM:PF00743 | PIRSF:PIRSF000332 |
| PRINTS:PR00370 | PANTHER:PTHR23023 | PANTHER:PTHR23023:SF86 | SUPFAM:SSF51905 | EnsemblPlantsGene:TraesCSU01G030500 | EnsemblPlants:TraesCSU01G030500.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:28785596..28787026
Molecular Weight (calculated)
46906.8 Da
IEP (calculated)
6.397
GRAVY (calculated)
-0.231
Length
426 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGDGEPVL QSKSVCVVGG GMAGLAAARE LRREGHAVTV MERSGDVGGQ WLYDPRTDAE DPLGAAVPVR VPSSIYACLR LITPREAMGF SDFQFLPRDG
101: PGRDPRRFPA HRELHCYLRD FCNAFGLMDA VRLNTRVLRV ALAPTSTTTT RQWAVRSVRR LGCTEDDEAQ EEEEVFDAVV VATGHYSQPM LPRDIEGMGE
201: WRRRQLHSHS YRTPEPFRGE TVVVVGCGDS GKDIALDLCR VAREVHLASS SGVATPAVSR MLANHGDVLR LHPRIRRLHA DGHVEFVDGS SVAADTVIYC
301: TGYTYSFPFL DTGGAVTVSD SGYVVGPLFE HVFPPSLAPS LSFVGVPRKV PVPWFFEVQA RWVAQVLSGR RALPAEEEML RSVEEHLRAR EAAGVPRKLT
401: HNIGGVEREK VYEFGEKYSD LAPLEE
101: PGRDPRRFPA HRELHCYLRD FCNAFGLMDA VRLNTRVLRV ALAPTSTTTT RQWAVRSVRR LGCTEDDEAQ EEEEVFDAVV VATGHYSQPM LPRDIEGMGE
201: WRRRQLHSHS YRTPEPFRGE TVVVVGCGDS GKDIALDLCR VAREVHLASS SGVATPAVSR MLANHGDVLR LHPRIRRLHA DGHVEFVDGS SVAADTVIYC
301: TGYTYSFPFL DTGGAVTVSD SGYVVGPLFE HVFPPSLAPS LSFVGVPRKV PVPWFFEVQA RWVAQVLSGR RALPAEEEML RSVEEHLRAR EAAGVPRKLT
401: HNIGGVEREK VYEFGEKYSD LAPLEE
001: MAPAQNQITS KHVAVIGAGP AGLITSRELR REGHSVVVFE REKQVGGLWV YTPKSDSDPL SLDPTRSKVH SSIYESLRTN VPRESMGVRD FPFLPRFDDE
101: SRDARRYPNH REVLAYIQDF AREFKIEEMI RFETEVVRVE PVDNGNWRVQ SKNSGGFLED EIYDAVVVCN GHYTEPNIAH IPGIKSWPGK QIHSHNYRVP
201: DPFENEVVVV IGNFASGADI SRDIAKVAKE VHIASRAREP HTYEKISVPQ NNLWMHSEID TTHEDGSIVF KNGKVIFADS IVYCTGYKYN FPFLETNGYL
301: RIDEKRVEPL YKHVFPPALA PGLAFVGLPA MGIVFVMFEI QSKWVAAVLS GRVTLPSTDK MMEDINAWYA SLDALGIPKR HTHTIGRIQV SSSYSE
101: SRDARRYPNH REVLAYIQDF AREFKIEEMI RFETEVVRVE PVDNGNWRVQ SKNSGGFLED EIYDAVVVCN GHYTEPNIAH IPGIKSWPGK QIHSHNYRVP
201: DPFENEVVVV IGNFASGADI SRDIAKVAKE VHIASRAREP HTYEKISVPQ NNLWMHSEID TTHEDGSIVF KNGKVIFADS IVYCTGYKYN FPFLETNGYL
301: RIDEKRVEPL YKHVFPPALA PGLAFVGLPA MGIVFVMFEI QSKWVAAVLS GRVTLPSTDK MMEDINAWYA SLDALGIPKR HTHTIGRIQV SSSYSE
Arabidopsis Description
FMOGS-OX3Flavin-containing monooxygenase FMO GS-OX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXE1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.