Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS5A01G201500.1 | |
| TraesCS5B01G200200.1 | |
| TraesCS5D01G207800.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61290.1 | TraesCS5A01G201500.1 | AT2G19560.1 | 19843313 |
| AT5G61290.1 | TraesCS5B01G200200.1 | AT2G19560.1 | 19843313 |
| AT5G61290.1 | TraesCS5D01G207800.1 | AT2G19560.1 | 19843313 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G531000.1 | Wheat | cytosol | 92.48 | 49.7 |
| TraesCSU01G033300.1 | Wheat | cytosol | 77.07 | 42.18 |
| TraesCSU01G030500.1 | Wheat | cytosol | 66.17 | 41.31 |
| TraesCSU01G032200.1 | Wheat | peroxisome | 71.8 | 39.79 |
| Os02t0580600-01 | Rice | cytosol | 58.65 | 33.26 |
| Os07t0112100-00 | Rice | cytosol | 59.77 | 31.18 |
| TraesCS7D01G425900.1 | Wheat | cytosol | 56.77 | 31.01 |
| TraesCSU01G045200.2 | Wheat | cytosol | 56.39 | 28.96 |
| CDY02158 | Canola | cytosol | 42.48 | 28.18 |
| CDY23072 | Canola | cytosol | 42.48 | 28.18 |
| TraesCSU01G087500.1 | Wheat | cytosol | 54.51 | 27.2 |
| PGSC0003DMT400063125 | Potato | cytosol, peroxisome, plastid | 46.24 | 27.03 |
| VIT_17s0000g06790.t01 | Wine grape | cytosol, peroxisome, plastid | 45.49 | 26.65 |
| Solyc03g115560.2.1 | Tomato | cytosol, peroxisome, plastid | 45.49 | 26.59 |
| CDX69991 | Canola | cytosol, mitochondrion, peroxisome, plastid | 44.36 | 26.05 |
| CDX99030 | Canola | cytosol, mitochondrion, peroxisome, plastid | 43.98 | 25.83 |
| Bra012970.1-P | Field mustard | cytosol | 43.23 | 25.73 |
| CDY14028 | Canola | cytosol, mitochondrion, peroxisome, plastid | 44.36 | 25.71 |
| Bra009308.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 44.36 | 25.6 |
| CDY23071 | Canola | cytosol | 44.36 | 25.54 |
| CDY02157 | Canola | cytosol | 43.98 | 25.32 |
| CDY40773 | Canola | mitochondrion | 43.61 | 25.27 |
| Bra028683.1-P | Field mustard | mitochondrion | 43.23 | 25.05 |
| AT5G07800.1 | Thale cress | cytosol | 43.23 | 25.0 |
| Bra012971.1-P | Field mustard | cytosol | 42.48 | 24.57 |
| AT5G61290.1 | Thale cress | cytosol | 41.35 | 23.86 |
| VIT_17s0000g06780.t01 | Wine grape | cytosol, peroxisome, plastid | 46.24 | 11.54 |
| KRH55196 | Soybean | cytosol, mitochondrion, peroxisome | 1.5 | 3.51 |
Protein Annotations
| EnsemblPlants:TraesCSU01G033200.1 | EnsemblPlantsGene:TraesCSU01G033200 | Gene3D:3.50.50.60 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004499 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0050660 | GO:GO:0050661 |
| GO:GO:0055114 | InterPro:FAD/NAD-bd_sf | InterPro:Flavin_mOase-like | InterPro:IPR036188 | PANTHER:PTHR23023 | PANTHER:PTHR23023:SF159 |
| PFAM:PF00743 | SEG:seg | SUPFAM:SSF51905 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrUn:+:29847000..29848469
Molecular Weight (calculated)
29197.6 Da
IEP (calculated)
4.686
GRAVY (calculated)
-0.131
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVVGGGDSG KDIALDLCHV AREVHLAASS EDATPAILRM LANHGDVLRL HPRIRQLHAD GRVEFADGSS VVADTVIYCT GYAYSFPFLD TGGAVTVSDD
101: GYVVGPLFEH VFPPSLAPSL SFVGVPRKIP IPWFLEVQAR WVAQVLSGRR ELPPEEEMLR SVEEHLRARE AAGVPRKLTH NIGSIEPHTI FEFGEKYCDF
201: TPLEEWKKEL MVSSVVSMMD DVETFRDLSN DSENVQKGLQ EWRLGAAAQG QAKPITTPVD AEGDGF
101: GYVVGPLFEH VFPPSLAPSL SFVGVPRKIP IPWFLEVQAR WVAQVLSGRR ELPPEEEMLR SVEEHLRARE AAGVPRKLTH NIGSIEPHTI FEFGEKYCDF
201: TPLEEWKKEL MVSSVVSMMD DVETFRDLSN DSENVQKGLQ EWRLGAAAQG QAKPITTPVD AEGDGF
001: MATSHPDPTT SRHVAVIGAG AAGLVAAREL RREGHSVVVL ERGSQIGGVW AYTSQVEPDP LSLDPTRPVV HSSLYRSLRT NIPRECMGFT DFPFATRPHD
101: GSRDPRRHPA HTEVLAYLRD FAKEFDIEEM VRFETEVVKA EQVAAEGEER GKWRVESRSS DGVVDEIYDA VVVCNGHYTE PRHALITGID SWPGKQIHSH
201: NYRVPDQFKD QVVIVIGSSA SGVDICRDIA QVAKEVHVSS RSTSPDTYEK LTGYENLWLH STIQIAREDG SVVFENGKTI YADTIMHCTG YKYYFPFLDT
301: KGEVTVDDNR VGPLYKHVFP PALAPSLSFI GLPWQITPFP MFELQSKWVA AVLSGRVSLP SQDEMMEDTK AFYDKLEASG IPKRYTHLMP DDSQFEYDNW
401: LADQCEYPRI EKWREQMFYI GFKRIYAQSS TYRDNWDDDH LIVEAYDDFV KFMSSYQELL PMLKT
101: GSRDPRRHPA HTEVLAYLRD FAKEFDIEEM VRFETEVVKA EQVAAEGEER GKWRVESRSS DGVVDEIYDA VVVCNGHYTE PRHALITGID SWPGKQIHSH
201: NYRVPDQFKD QVVIVIGSSA SGVDICRDIA QVAKEVHVSS RSTSPDTYEK LTGYENLWLH STIQIAREDG SVVFENGKTI YADTIMHCTG YKYYFPFLDT
301: KGEVTVDDNR VGPLYKHVFP PALAPSLSFI GLPWQITPFP MFELQSKWVA AVLSGRVSLP SQDEMMEDTK AFYDKLEASG IPKRYTHLMP DDSQFEYDNW
401: LADQCEYPRI EKWREQMFYI GFKRIYAQSS TYRDNWDDDH LIVEAYDDFV KFMSSYQELL PMLKT
Arabidopsis Description
Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178W1K3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.