CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH02720
KRH19149

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	KRH02720	AT2G19560.1	19843313
AT5G61290.1	KRH19149	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56869	Soybean	cytosol	85.78	85.03
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	19.91	79.82
KRH56868	Soybean	cytosol, peroxisome, plastid	64.11	79.19
KRH63273	Soybean	cytosol, peroxisome, plastid	76.37	76.03
KRH54615	Soybean	cytosol	49.89	72.38
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	70.24	70.55
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	70.02	70.33
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	69.58	70.04
Bra012970.1-P	Field mustard	cytosol	64.33	65.77
Bra012971.1-P	Field mustard	cytosol	66.08	65.65
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	65.65	65.36
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	64.77	65.34
AT5G61290.1	Thale cress	cytosol	65.65	65.08
Bra028683.1-P	Field mustard	mitochondrion	65.21	64.92
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	64.33	64.9
CDY02158	Canola	cytosol	56.89	64.84
CDY40773	Canola	mitochondrion	64.99	64.71
CDY23072	Canola	cytosol	56.67	64.59
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	64.99	64.43
AT5G07800.1	Thale cress	cytosol	64.77	64.35
CDY02157	Canola	cytosol	64.99	64.29
CDY23071	Canola	cytosol	64.55	63.85
KRH28040	Soybean	peroxisome, plastid	44.2	44.2
KRH20786	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.58	43.28
KRH30009	Soybean	endoplasmic reticulum, mitochondrion	40.48	41.76
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	68.93	29.55

Protein Annotations

EntrezGene:100818066	Gene3D:3.50.50.60	MapMan:35.1	EMBL:ACUP02002798	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase
InterPro:Flavin_mOase-like	EnsemblPlantsGene:GLYMA_05G023800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	UniProt:I1JZL5	InterPro:IPR036188	EnsemblPlants:KRH56870	ProteinID:KRH56870
ProteinID:KRH56870.1	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86
SUPFAM:SSF51905	UniParc:UPI0001CA930B	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:2066114..2068799

Molecular Weight (calculated)

52257.2 Da

IEP (calculated)

5.369

GRAVY (calculated)

-0.358

Length

457 amino acids

Sequence
(BLAST)

001: MASETNQSKN VCVIGAGPSG LLAARELRKE GHKVVVLEQN HDIGGQWLYD PNVQEEDPLG RDPWLKVHSS IYESLRFMSP REIMGSTDFP FLVKKGRDTR
101: RFPSHTEFLL YLKDFCEWFK LSEMIKLNTK VHYVGPLNYG VPSEDLKWVV RSKENKSEEE VEQVFDAVVV ATGHFSNPRL PCIQGMDTWK RKQMHSHIYR
201: SSEPFRGEIV VVVGNFLSGQ EISMELVKVA KEVHLSSKSL IIFEGLSKVI SKNENFHLRP QIDTLQEDGT VIFTDGSNII ADTILYCTGY NYSYPFLDTK
301: GIVVVDDNRV GPLYEHTFPP SLAPSLSFVG IPRKILGITF FESQGKWIAQ LLSGKKVLPS YEEMMESIEE FYHSNEVAGI PKRYTHVVDA FDYCDKYGEN
401: VGFPKTEEWR KELCISAGMN AFANLETYRD SWNDDIDEKL QEALRSPYFT QLEQLSL

Best Arabidopsis Sequence Match ( AT5G61290.1 )
(BLAST)

001: MVLVITEPIK SQSKTVCVIG AGPSGLVSAR ELKKEGHKVV VMEQNHDVGG QWLYQPNVDE EDTLGKTKTL KVHSSVYSSL RLASPREVMG FSDFPFIAKE
101: GRDSRRFPGH EELLLYLKDF CQVFGLREMI RFNVRVEFVG MVNEDDDDDD DVKKWMVKSV KKSGEVMEEV FDAVVVASGH YSYPRLPTIK GMDLWKRKQL
201: HSHIYRVPEP FCDEVVVVVG CSMSGQDISI ELVEVAKEVH LSTKSLDIPP GLSKVIEKHQ NLHLHPQIES LEEDGRVIFE DGSCIVADTI LYCTGYEYKF
301: PFLESKGRVE IDDNRVGPLF EHTFSPSLSP FLSFVGIPRK LIGFPFFESQ AKWIAKLLSG KTSLPSSDQM MQSISDFYLA READGIPKRN THDIADFNYS
401: DKYADYIGFP HLEEWRKVLC LSAILNSIEN LETYRDSWDD DDLLQETLQD PYFTQLSIPS V

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.