CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum

Predictor Summary:

plastid 4
mitochondrion 3
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0019g00620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.79	62.94
KRH20786	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.3	62.87
VIT_13s0019g00660.t01	Wine grape	mitochondrion	63.88	61.66
VIT_00s0131g00120.t01	Wine grape	cytosol	33.18	56.32
KXG38941	Sorghum	mitochondrion	51.02	51.95
KXG38945	Sorghum	mitochondrion	50.34	51.26
OQU92163	Sorghum	mitochondrion	50.34	51.03
KRH28040	Soybean	peroxisome, plastid	52.37	50.77
Zm00001d029924_P001	Maize	mitochondrion	49.44	50.46
EER94515	Sorghum	cytosol	49.44	50.23
TraesCS1A01G211100.1	Wheat	peroxisome	48.76	47.68
KRH54615	Soybean	cytosol	30.25	42.54
KRH63273	Soybean	cytosol, peroxisome, plastid	44.02	42.48
KRH56868	Soybean	cytosol, peroxisome, plastid	34.31	41.08
KRH56869	Soybean	cytosol	42.66	41.0
Zm00001d029922_P001	Maize	mitochondrion	43.79	40.5
KRH56870	Soybean	cytosol, nucleus, peroxisome	41.76	40.48
TraesCS1D01G214400.1	Wheat	peroxisome	42.89	37.33
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	9.48	36.84
Os10t0554300-00	Rice	cytosol, peroxisome, plastid	34.09	31.2

Protein Annotations

EntrezGene:100804341	Gene3D:3.50.50.60	MapMan:35.1	EMBL:ACUP02006840	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase
InterPro:Flavin_mOase-like	EnsemblPlantsGene:GLYMA_11G153100	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	UniProt:K7LQK0	EnsemblPlants:KRH30009	ProteinID:KRH30009
ProteinID:KRH30009.1	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF198
SUPFAM:SSF51905	UniParc:UPI0002949776	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:12285531..12292304

Molecular Weight (calculated)

50708.7 Da

IEP (calculated)

6.993

GRAVY (calculated)

-0.290

Length

443 amino acids

Sequence
(BLAST)

001: MTHPLRVAVI GAGVAGLAAA RSLRREGLDV VVFEKSNHLG GTWSYDPRTD SDPVGLDPNR EVVHTSLYRS LRTNLPRQLM GFLDYPFPNR NNGDPRTFPG
101: HEEVLWFLNR FSDEFGLRGL TRFGSEVVRV ELVSEKSDSW VVESRRNRDS VLTREVFGAV VVCTGHFTQP RLPTIPGIEK WPGYQIHSHN YRVPEPFQGQ
201: IVVVIGFASS AFDISREIAK VAKEVHIATR SPDVKVMKLA NHDNMWQHKM VKCVSEDRLV AFDDGSSVYA DVLFYCTGYK YHFPFLETNG IVTIEDNRVG
301: PLYKHVFPPA LAPWLSFIGI PEKEVIFQMT ELQCKWVARV LSGKVLLPTE KEMMAYVEEY YQQMEKDGFP KHMTHYLHFK EIGYCNWLAA KAGLPPIEHW
401: RDAMYLESIK PVLLGLQDNY RDQWDDAHWK AIIKDASLPQ NVN

Best Arabidopsis Sequence Match ( AT1G12160.1 )
(BLAST)

001: MTSVITSRAR HVAVIGLGAA GLVAVRELRR EGHTVIGFER EKHVGGLWVY TDRVDSDSVS VDPDRTIVHS SIYQSLRTNL PRECMGYSDF PFVTRSSDGD
101: PRRYPDHREV LMYLQDFAKE FKIEDMIRFE TEVLCVEPSP ENNRKWRVQF KSSNGVSGEE IFDAVVVCNG HFTEPRLAHI PGIESWPGKQ IHSHNYRIPD
201: PFKDEVVIVI GSQASGNDIS TDIATIAKEV HISSKMVASD SYGCYDNLRI HPTIYRARED GSVVFRNGKV VFADAIVHCT GYKYHFPFLK TSGYVTVEDN
301: RVGPLYKHVF PPALAPGISF IGLPFMGLQF FMFEIQSKWV ASVLSGRVKL PAEDKMMEEA VAFYSKLEDL GIPKRYTHFL TDPRGNPMLG TFKPEDAVVI
401: SQSDYFNWIA KQCGCTSIER WRERLYNVAI KKVFFGGDSY RDRWDDDQLI EEVYREFAKL KPNQDCSS

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWW6]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.