CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38945	Sorghum	mitochondrion	75.86	75.86
OQU92163	Sorghum	mitochondrion	75.86	75.51
EER94515	Sorghum	cytosol	74.48	74.31
Zm00001d029922_P001	Maize	mitochondrion	76.78	69.73
TraesCS1A01G211100.1	Wheat	peroxisome	71.26	68.43
TraesCS1D01G214400.1	Wheat	peroxisome	62.76	53.63
KRH30009	Soybean	endoplasmic reticulum, mitochondrion	51.95	51.02
KRH20786	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	50.11	49.66
EER91959	Sorghum	mitochondrion	50.57	49.44
Solyc05g050920.2.1	Tomato	cytosol	47.82	49.29
Solyc05g050910.2.1	Tomato	cytosol, nucleus, peroxisome	48.51	48.62
Solyc06g062310.2.1	Tomato	cytosol	21.61	48.45
OQU92170	Sorghum	cytosol	40.23	47.43
VIT_13s0019g00660.t01	Wine grape	mitochondrion	49.43	46.84
VIT_13s0019g00620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.97	46.71
EER97845	Sorghum	cytosol	42.53	43.84
OQU88310	Sorghum	cytosol, mitochondrion	42.07	43.06
KXG40414	Sorghum	cytosol	37.93	42.86
Os10t0554300-00	Rice	cytosol, peroxisome, plastid	45.52	40.91
EER95747	Sorghum	cytosol	43.45	39.96
VIT_00s0131g00120.t01	Wine grape	cytosol	23.45	39.08
Solyc06g062320.1.1	Tomato	cytosol	10.11	33.59
CDY27691	Canola	cytosol	10.57	32.86

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	UniProt:A0A1B6QLZ2	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114
InterPro:IPR036188	EnsemblPlants:KXG38941	ProteinID:KXG38941	ProteinID:KXG38941.1	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF138	EnsemblPlantsGene:SORBI_3001G302400	SUPFAM:SSF51905	UniParc:UPI00081ABECA
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:58508401..58510767

Molecular Weight (calculated)

48505.5 Da

IEP (calculated)

6.169

GRAVY (calculated)

-0.275

Length

435 amino acids

Sequence
(BLAST)

001: MPRMVAVVGA GPAGLVAARQ LLREGLHVAV FEKSGRAGGT WAYDPRADAD DPLSRDPGAP GAVHGSLYAS LRTNLPRDLM GFSDFPMAGR VFAGDARAFP
101: GHREVLAFLD AFAEESGVAA RVRLRSEVVR VAPALGHGER WVVAWRREDG EVVEEVFDAV VVCNGHWTVP MVPKIRGIDN WSGKQIHSHN YRTPEPFRDQ
201: NVVVVGFSAS GIDIALEISH FAKEVHVADR YSKDRLGKIA LYKNVWIHAE VDCIQDDGKV RFAEGSVVAA DIILYCTGYR YHFPFLDLDG LTVDDNRVGP
301: LYKHVFPPKY APNLSFVGLA YKTIVFQTLE QESKWVAAVL SGRATLPSEE DMMAAVREHY QLMEEAGRPK RHTHTLSPQW AEHMNWLAGQ VGEPPLEPWK
401: REMFDRVLGS ILTLDEAYRD RWEQEEDRDS GTGAH

Best Arabidopsis Sequence Match ( AT1G12140.3 )
(BLAST)

001: MAPARTRVNS LNVAVIGAGA AGLVAARELR RENHTVVVFE RDSKVGGLWV YTPNSEPDPL SLDPNRTIVH SSVYDSLRTN LPRECMGYRD FPFVPRPEDD
101: ESRDSRRYPS HREVLAYLED FAREFKLVEM VRFKTEVVLV EPEDKKWRVQ SKNSDGISKD EIFDAVVVCN GHYTEPRVAH VPGIDSWPGK QIHSHNYRVP
201: DQFKDQVVVV IGNFASGADI SRDITGVAKE VHIASRSNPS KTYSKLPGSN NLWLHSMIES VHEDGTIVFQ NGKVVQADTI VHCTGYKYHF PFLNTNGYIT
301: VEDNCVGPLY EHVFPPALAP GLSFIGLPWM TLQFFMFELQ SKWVAAALSG RVTLPSEEKM MEDVTAYYAK REAFGQPKRY THRLGGGQVD YLNWIAEQIG
401: APPGEQWRYQ EINGGYYRLA TQSDTFRDKW DDDHLIVEAY EDFLRQKLIS SLPSQLLES

Arabidopsis Description

FMOGS-OX5Flavin-containing monooxygenase FMO GS-OX5 [Source:UniProtKB/Swiss-Prot;Acc:A8MRX0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.