CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER98853

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	EER98853	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018650_P001	Maize	cytosol	84.6	77.11
EER95747	Sorghum	cytosol	74.64	66.6
OQU88310	Sorghum	cytosol, mitochondrion	64.45	64.0
Zm00001d018649_P001	Maize	cytosol	71.09	62.24
Os07t0111700-01	Rice	cytosol, peroxisome	63.27	57.17
Os07t0112000-00	Rice	cytosol	64.69	56.99
Os07t0111900-00	Rice	extracellular	63.27	56.09
Os01t0368000-00	Rice	cytosol	59.24	54.59
Os06t0528700-01	Rice	plasma membrane	62.09	54.02
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	50.71	47.03
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	50.47	46.81
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	50.24	46.7
Bra012970.1-P	Field mustard	cytosol	48.58	45.86
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	49.05	45.7
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	48.58	45.25
Bra012971.1-P	Field mustard	cytosol	49.29	45.22
CDY40773	Canola	mitochondrion	49.05	45.1
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	49.05	45.1
Bra028683.1-P	Field mustard	mitochondrion	48.82	44.88
CDY02157	Canola	cytosol	49.05	44.81
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	12.09	44.74
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	48.82	44.69
AT5G61290.1	Thale cress	cytosol	48.82	44.69
CDY23071	Canola	cytosol	48.82	44.59
AT5G07800.1	Thale cress	cytosol	48.58	44.57
CDY02158	Canola	cytosol	41.71	43.89
CDY23072	Canola	cytosol	41.47	43.64
KXG38941	Sorghum	mitochondrion	43.84	42.53
OQU92163	Sorghum	mitochondrion	42.89	41.42
KXG38945	Sorghum	mitochondrion	42.65	41.38
EER91959	Sorghum	mitochondrion	43.6	41.35
EER94515	Sorghum	cytosol	42.18	40.83
KXG40414	Sorghum	cytosol	35.07	38.44
OQU92170	Sorghum	cytosol	32.94	37.67
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	50.71	20.07

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	UniProt:C5X791	EnsemblPlants:EER97845	ProteinID:EER97845	ProteinID:EER97845.3
InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	EnsemblPlantsGene:SORBI_3002G008300	SUPFAM:SSF51905	UniParc:UPI0009DC82F2
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:763883..765571

Molecular Weight (calculated)

46798.9 Da

IEP (calculated)

5.563

GRAVY (calculated)

-0.379

Length

422 amino acids

Sequence
(BLAST)

001: MASSSKKVCV VGAGVSGLVS ARELRREGHE VTVMEQSSGV GGQWLYDART DSGDPLGVAG VPSSIYASLR LNTPRESMGF SDYPFVYPSI DDDDGDARRY
101: PGHAEFLRYI RGFCDAFGLM DAVRLNTKVL HVGLLAPPGH DDDGGVTRWT VRCSSRRGDC EGEVVTTEET FDAVVVAVGQ FTHPRLPTIN GMDKWSRRQL
201: HSHSYRTPDS FQDQVVVVVG CQSSGIDCLC EDGQVVFADG SSVIADAVVY CTGYDLSFPF LDTGGVVTVD DNRVGPLYEH TFPPALAPSL SFVGVPKRVV
301: VPRFYETQAR WVAQVLSGRR MLPSSEEMMA WAEEHHRARE MAGMPKRHAH EFFDDYNCCD EFGEKHCGFP RLEDWKKELR WASVTRQRGD GSETFRDVYH
401: DSELVRQGLL AQGWPAGSQQ HK

Best Arabidopsis Sequence Match ( AT5G61290.1 )
(BLAST)

001: MVLVITEPIK SQSKTVCVIG AGPSGLVSAR ELKKEGHKVV VMEQNHDVGG QWLYQPNVDE EDTLGKTKTL KVHSSVYSSL RLASPREVMG FSDFPFIAKE
101: GRDSRRFPGH EELLLYLKDF CQVFGLREMI RFNVRVEFVG MVNEDDDDDD DVKKWMVKSV KKSGEVMEEV FDAVVVASGH YSYPRLPTIK GMDLWKRKQL
201: HSHIYRVPEP FCDEVVVVVG CSMSGQDISI ELVEVAKEVH LSTKSLDIPP GLSKVIEKHQ NLHLHPQIES LEEDGRVIFE DGSCIVADTI LYCTGYEYKF
301: PFLESKGRVE IDDNRVGPLF EHTFSPSLSP FLSFVGIPRK LIGFPFFESQ AKWIAKLLSG KTSLPSSDQM MQSISDFYLA READGIPKRN THDIADFNYS
401: DKYADYIGFP HLEEWRKVLC LSAILNSIEN LETYRDSWDD DDLLQETLQD PYFTQLSIPS V

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.