CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92163	Sorghum	mitochondrion	92.18	91.76
EER94515	Sorghum	cytosol	91.95	91.74
Zm00001d029924_P001	Maize	mitochondrion	89.89	90.09
KXG38941	Sorghum	mitochondrion	75.86	75.86
TraesCS1A01G211100.1	Wheat	peroxisome	72.87	69.98
TraesCS1D01G214400.1	Wheat	peroxisome	64.37	55.01
Solyc06g062310.2.1	Tomato	cytosol	22.76	51.03
KRH30009	Soybean	endoplasmic reticulum, mitochondrion	51.26	50.34
EER91959	Sorghum	mitochondrion	51.49	50.34
Solyc05g050920.2.1	Tomato	cytosol	48.05	49.53
KRH20786	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.89	49.43
Solyc05g050910.2.1	Tomato	cytosol, nucleus, peroxisome	48.74	48.85
VIT_13s0019g00620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.97	46.71
OQU92170	Sorghum	cytosol	38.85	45.8
VIT_13s0019g00660.t01	Wine grape	mitochondrion	48.28	45.75
EER97845	Sorghum	cytosol	41.38	42.65
Os10t0554300-00	Rice	cytosol, peroxisome, plastid	46.9	42.15
OQU88310	Sorghum	cytosol, mitochondrion	40.92	41.88
KXG40414	Sorghum	cytosol	36.78	41.56
VIT_00s0131g00120.t01	Wine grape	cytosol	24.6	41.0
EER95747	Sorghum	cytosol	41.61	38.27
CDY27691	Canola	cytosol	11.03	34.29
Solyc06g062320.1.1	Tomato	cytosol	9.89	32.82

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	UniProt:A0A1B6QM04	ncoils:Coil	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase
InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661
GO:GO:0055114	InterPro:IPR036188	EnsemblPlants:KXG38945	ProteinID:KXG38945	ProteinID:KXG38945.1	PFAM:PF00743
PIRSF:PIRSF000332	PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF138	EnsemblPlantsGene:SORBI_3001G302732	SUPFAM:SSF51905
UniParc:UPI00081AC475	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:58557114..58559490

Molecular Weight (calculated)

48443.3 Da

IEP (calculated)

6.091

GRAVY (calculated)

-0.313

Length

435 amino acids

Sequence
(BLAST)

001: MRRRAEVAVV GAGPAGLVAA RELLREGHAV AVFEKSGRVG GTWAYDPRAD ADPLGRDPGA PGAVHSSLYA SLRTNLPREL MGFSGFPLAG RVFAGDPRTF
101: PGHREVLAFL DAFAVDSGVA AHVRLGAEVL RVRPLCRGQQ GEQWAVAWRG EDGGVAEEAF DAVVVCSGHC SVPLLPKIRG INEWQGKQMH SHNYRTPEPF
201: QDQSVVIVGL GASGIDIARE ISHVAKEVHF AARYSEDRLG KIELYHNAWM HGEIECIQDD GLVRFAEGSS VAADTILYCT GYRYHFPFLD LDGFTVDDNR
301: VGPLYKHVFP PKYAPNLSFV GLPYKSIIFS ALELESKWVA AVLSGRATLP SEEDMMANVQ EDYQRMEDAR KPKRHTHTLW PRWVEYLNWL ADQVGETHVE
401: PRRSEMYEKA LRCVWSLDEG YRDRWEEENI GCGSP

Best Arabidopsis Sequence Match ( AT1G12200.1 )
(BLAST)

001: MATSHPDPTT SRHVAVIGAG AAGLVAAREL RREGHSVVVL ERGSQIGGVW AYTSQVEPDP LSLDPTRPVV HSSLYRSLRT NIPRECMGFT DFPFATRPHD
101: GSRDPRRHPA HTEVLAYLRD FAKEFDIEEM VRFETEVVKA EQVAAEGEER GKWRVESRSS DGVVDEIYDA VVVCNGHYTE PRHALITGID SWPGKQIHSH
201: NYRVPDQFKD QVVIVIGSSA SGVDICRDIA QVAKEVHVSS RSTSPDTYEK LTGYENLWLH STIQIAREDG SVVFENGKTI YADTIMHCTG YKYYFPFLDT
301: KGEVTVDDNR VGPLYKHVFP PALAPSLSFI GLPWQITPFP MFELQSKWVA AVLSGRVSLP SQDEMMEDTK AFYDKLEASG IPKRYTHLMP DDSQFEYDNW
401: LADQCEYPRI EKWREQMFYI GFKRIYAQSS TYRDNWDDDH LIVEAYDDFV KFMSSYQELL PMLKT

Arabidopsis Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178W1K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.