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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • peroxisome 1
  • plastid 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, peroxisome
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g050920.2.1 Tomato cytosol 88.94 91.47
Solyc06g062310.2.1 Tomato cytosol 24.88 55.67
Zm00001d029924_P001 Maize mitochondrion 50.0 50.0
Solyc06g060610.2.1 Tomato mitochondrion 53.69 48.85
KXG38945 Sorghum mitochondrion 48.85 48.74
KXG38941 Sorghum mitochondrion 48.62 48.51
EER94515 Sorghum cytosol 48.62 48.39
OQU92163 Sorghum mitochondrion 48.16 47.83
TraesCS1A01G211100.1 Wheat peroxisome 48.39 46.36
Solyc03g115560.2.1 Tomato cytosol, peroxisome, plastid 45.85 43.74
Zm00001d029922_P001 Maize mitochondrion 41.01 37.16
TraesCS1D01G214400.1 Wheat peroxisome 41.47 35.36
Solyc06g062320.1.1 Tomato cytosol 9.91 32.82
Os10t0554300-00 Rice cytosol, peroxisome, plastid 34.33 30.79
Protein Annotations
Gene3D:3.50.50.60MapMan:35.1ncoils:CoilInterPro:FAD/NAD-bd_sfInterPro:Flavin_mOaseInterPro:Flavin_mOase-like
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0004499GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0050660GO:GO:0050661GO:GO:0055114
InterPro:IPR036188UniProt:K4C1C3PFAM:PF00743PIRSF:PIRSF000332PRINTS:PR00370PANTHER:PTHR23023
PANTHER:PTHR23023:SF198SUPFAM:SSF51905EnsemblPlantsGene:Solyc05g050910.2EnsemblPlants:Solyc05g050910.2.1UniParc:UPI000276741BSEG:seg
Description
Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:K4C1C3]
Coordinates
chr5:-:61130644..61133608
Molecular Weight (calculated)
49139.3 Da
IEP (calculated)
5.045
GRAVY (calculated)
-0.280
Length
434 amino acids
Sequence
(BLAST)
001: MAESRKVAVI GAGPSGLVTT RELQREGHRV VVFEKSNQLG GLWAYNPRVE TDLLSLDPNR EIVHSSLYKS LRTNLPRKLM SFSDYSFDCA ENGNQLNFPG
101: HEEVLKFLNE FANDFVINEL IRFNTEVVRV APVEFGGNRW IVESKSEELS SEEVFDSVVI CNGHYTVPRI ANIPGINKWP GKQIHSHNYR VPEPFKDQIV
201: VVIGDGPSGL DICRDIATVA KQVHLSTRYS EIEVSKLDNY ENLWNHSKIE HVDESGEVIF FDGSSIHADI ILHSTGYKYD FPFLETNGLV SVDEEGRVVG
301: PLYKHVFPPK LSPCLSFVGI PSKGIIFLGS ELQAKWIAQV LSGKVLLPSE EEMLADVEDH NRQLEEAGIP KRDTHRLHPH VMEYMDWIAA QMGMPSLDPS
401: LKEMYWSIYK CAGEVGYDNY RDLWVFENLT QSSL
Best Arabidopsis Sequence Match ( AT1G12200.1 )
(BLAST)
001: MATSHPDPTT SRHVAVIGAG AAGLVAAREL RREGHSVVVL ERGSQIGGVW AYTSQVEPDP LSLDPTRPVV HSSLYRSLRT NIPRECMGFT DFPFATRPHD
101: GSRDPRRHPA HTEVLAYLRD FAKEFDIEEM VRFETEVVKA EQVAAEGEER GKWRVESRSS DGVVDEIYDA VVVCNGHYTE PRHALITGID SWPGKQIHSH
201: NYRVPDQFKD QVVIVIGSSA SGVDICRDIA QVAKEVHVSS RSTSPDTYEK LTGYENLWLH STIQIAREDG SVVFENGKTI YADTIMHCTG YKYYFPFLDT
301: KGEVTVDDNR VGPLYKHVFP PALAPSLSFI GLPWQITPFP MFELQSKWVA AVLSGRVSLP SQDEMMEDTK AFYDKLEASG IPKRYTHLMP DDSQFEYDNW
401: LADQCEYPRI EKWREQMFYI GFKRIYAQSS TYRDNWDDDH LIVEAYDDFV KFMSSYQELL PMLKT
Arabidopsis Description
Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178W1K3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.