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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plasma membrane 1
  • mitochondrion 3
  • peroxisome 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g060610.2.1 Tomato mitochondrion 71.76 19.71
CDY27691 Canola cytosol 19.85 18.57
VIT_00s0131g00120.t01 Wine grape cytosol 32.06 16.09
VIT_13s0019g00660.t01 Wine grape mitochondrion 35.88 10.24
KXG38941 Sorghum mitochondrion 33.59 10.11
EER94515 Sorghum cytosol 33.59 10.09
OQU92163 Sorghum mitochondrion 33.59 10.07
Solyc05g050910.2.1 Tomato cytosol, nucleus, peroxisome 32.82 9.91
KXG38945 Sorghum mitochondrion 32.82 9.89
Solyc05g050920.2.1 Tomato cytosol 31.3 9.72
Solyc03g115560.2.1 Tomato cytosol, peroxisome, plastid 33.59 9.67
Zm00001d029924_P001 Maize mitochondrion 31.3 9.45
VIT_13s0019g00620.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 32.82 9.43
KRH20786 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 31.3 9.34
Zm00001d029922_P001 Maize mitochondrion 32.06 8.77
TraesCS1A01G211100.1 Wheat peroxisome 29.01 8.39
TraesCS1D01G214400.1 Wheat peroxisome 30.53 7.86
Os10t0554300-00 Rice cytosol, peroxisome, plastid 15.27 4.13
Solyc06g062310.2.1 Tomato cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Solyc06g062320.1.1EnsemblPlantsGene:Solyc06g062320.1Gene3D:3.50.50.60InterPro:FAD/NAD-bd_sfInterPro:IPR036188PANTHER:PTHR23023
PANTHER:PTHR23023:SF195UniParc:UPI0002766759UniProt:K4C6W3MapMan:35.1::
Description
No Description!
Coordinates
chr6:+:39312590..39313536
Molecular Weight (calculated)
15449.5 Da
IEP (calculated)
4.969
GRAVY (calculated)
-0.519
Length
131 amino acids
Sequence
(BLAST)
001: MPWKLIPFPR CELQSKWIAG VLSGRISLLS KEDMIADIDA FYSSLDASCI PKRHTHNMDF QLDYEDWLAA KCGSPPPEKW RKEMFFIARE KIKTQTERYR
101: DQWDDDDLII QAPQEFVQFI PELPQVQKLS T
Best Arabidopsis Sequence Match ( AT1G12200.1 )
(BLAST)
001: MATSHPDPTT SRHVAVIGAG AAGLVAAREL RREGHSVVVL ERGSQIGGVW AYTSQVEPDP LSLDPTRPVV HSSLYRSLRT NIPRECMGFT DFPFATRPHD
101: GSRDPRRHPA HTEVLAYLRD FAKEFDIEEM VRFETEVVKA EQVAAEGEER GKWRVESRSS DGVVDEIYDA VVVCNGHYTE PRHALITGID SWPGKQIHSH
201: NYRVPDQFKD QVVIVIGSSA SGVDICRDIA QVAKEVHVSS RSTSPDTYEK LTGYENLWLH STIQIAREDG SVVFENGKTI YADTIMHCTG YKYYFPFLDT
301: KGEVTVDDNR VGPLYKHVFP PALAPSLSFI GLPWQITPFP MFELQSKWVA AVLSGRVSLP SQDEMMEDTK AFYDKLEASG IPKRYTHLMP DDSQFEYDNW
401: LADQCEYPRI EKWREQMFYI GFKRIYAQSS TYRDNWDDDH LIVEAYDDFV KFMSSYQELL PMLKT
Arabidopsis Description
Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178W1K3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.