CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

plastid 2
mitochondrion 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30009	Soybean	endoplasmic reticulum, mitochondrion	62.87	62.3
Solyc06g062310.2.1	Tomato	cytosol	23.23	52.58
KRH28040	Soybean	peroxisome, plastid	52.62	50.55
KXG38941	Sorghum	mitochondrion	49.66	50.11
KXG38945	Sorghum	mitochondrion	49.43	49.89
Zm00001d029924_P001	Maize	mitochondrion	48.52	49.08
OQU92163	Sorghum	mitochondrion	48.75	48.97
EER94515	Sorghum	cytosol	47.84	48.17
TraesCS1A01G211100.1	Wheat	peroxisome	48.29	46.8
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	11.62	44.74
KRH54615	Soybean	cytosol	30.98	43.17
KRH63273	Soybean	cytosol, peroxisome, plastid	44.19	42.27
KRH56870	Soybean	cytosol, nucleus, peroxisome	43.28	41.58
KRH56869	Soybean	cytosol	43.05	41.0
KRH56868	Soybean	cytosol, peroxisome, plastid	33.94	40.27
Zm00001d029922_P001	Maize	mitochondrion	42.6	39.04
CDY27691	Canola	cytosol	12.07	37.86
TraesCS1D01G214400.1	Wheat	peroxisome	42.82	36.94
Solyc06g062320.1.1	Tomato	cytosol	9.34	31.3
Os10t0554300-00	Rice	cytosol, peroxisome, plastid	32.35	29.34

Protein Annotations

EntrezGene:100786530	Gene3D:3.50.50.60	MapMan:35.1	EMBL:ACUP02008306	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase
InterPro:Flavin_mOase-like	EnsemblPlantsGene:GLYMA_13G200400	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	UniProt:I1M0V5	InterPro:IPR036188	EnsemblPlants:KRH20786	ProteinID:KRH20786
ProteinID:KRH20786.1	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF198
SUPFAM:SSF51905	UniParc:UPI000233BC31	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:31403066..31411738

Molecular Weight (calculated)

49862.4 Da

IEP (calculated)

5.825

GRAVY (calculated)

-0.288

Length

439 amino acids

Sequence
(BLAST)

001: MHRSLKVAVI GAGVSGLAAA RELRHEGHNV VVLEKSNHVG GMWAYDPKTD SDPLGLDPTR ETVHSSLYLS LRTNLPRQLM GFSDFPFVKN ESGDPRTFPG
101: HEEVLRFLEG FAGEFGINEL TQFETEVVRV ERKGNEWVVE SRTSRDGDSV SREGFDAVVV CSGHFVEPKL AEVPGIDTWR GFQMHSHNYR VPQPFHNQVV
201: ILIGLGPSAF DISREIAQVA REVHVATRLN PDLAGMKLGD YGKIMFRTAV KCVFEDGLVA FEDGFSVYAD AIIHCTGYKY HFPFLETNGL VTVDDNRVGP
301: LYKHVFPPAL SPWLSFIGLT FKNSVYQIIE LQCKWVAKVL SGKVLLPTEK EMMESVKEYY QLMEENGLPK RYTHSLYPLQ ADYKHWLVAE IGLPPLEEWK
401: ENMLKQCFKN FVEMNEKYRD EWDDTYWDAI IHGAPASEK

Best Arabidopsis Sequence Match ( AT1G62620.1 )
(BLAST)

001: MAPALSPTRS HHVAVIGAGP AGLVAARELR REGHSVVVFE KQKQVGGTWI YTDEVESDPL SVDPTRSVVH SSVYRSLRIN GTRECTGYRD FPFVVRSGVS
101: RDPRRFPSHG EVLAYLKDFA KEFGIEEMVR FETEVVKVSP AAEEGIGKWR IESTEKEKKV RRDEIYDAVV VCNGHYVEPR LAQIPGISSW PGKEMHSHNY
201: RIPEPFRDKV VVLIGNSSSA EDISRDIARV AKEVHVACRS NPADTFIKQT GYNNLWTHSM IESVHEDGSV VYQNGKTISV DIIMHCTGYK YHFPFLDTNG
301: IVTVDDNRVG PLYKDVFPPA FAPWLSFIGI PWQVLPFPMF ELQSKWIAGV LSGRIPLPSK EDMMIEIKTF YSTLEVQGIP KRYTHRMGNT QFEYYNWLAS
401: QCGCSETEEW RKEMCLANGV RKEAHPETYR DEWDDHHLVS EAYQDFSLYS

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.