Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61290.1 | KRH02720 | AT2G19560.1 | 19843313 |
| AT5G61290.1 | KRH19149 | AT2G19560.1 | 19843313 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH63273 | Soybean | cytosol, peroxisome, plastid | 93.97 | 64.49 |
| KRH56868 | Soybean | cytosol, peroxisome, plastid | 63.17 | 53.78 |
| KRH55196 | Soybean | cytosol, mitochondrion, peroxisome | 19.37 | 53.51 |
| VIT_17s0000g06790.t01 | Wine grape | cytosol, peroxisome, plastid | 76.19 | 52.86 |
| PGSC0003DMT400063125 | Potato | cytosol, peroxisome, plastid | 75.87 | 52.53 |
| Solyc03g115560.2.1 | Tomato | cytosol, peroxisome, plastid | 74.92 | 51.87 |
| KRH56869 | Soybean | cytosol | 73.02 | 49.89 |
| KRH56870 | Soybean | cytosol, nucleus, peroxisome | 72.38 | 49.89 |
| CDX99030 | Canola | cytosol, mitochondrion, peroxisome, plastid | 70.79 | 49.23 |
| CDX69991 | Canola | cytosol, mitochondrion, peroxisome, plastid | 70.16 | 48.79 |
| Bra009308.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 71.11 | 48.59 |
| AT5G07800.1 | Thale cress | cytosol | 70.16 | 48.04 |
| CDY40773 | Canola | mitochondrion | 69.84 | 47.93 |
| CDY14028 | Canola | cytosol, mitochondrion, peroxisome, plastid | 69.84 | 47.93 |
| Bra028683.1-P | Field mustard | mitochondrion | 69.84 | 47.93 |
| Bra012971.1-P | Field mustard | cytosol | 68.57 | 46.96 |
| AT5G61290.1 | Thale cress | cytosol | 67.3 | 45.99 |
| CDY02158 | Canola | cytosol | 58.1 | 45.64 |
| CDY23072 | Canola | cytosol | 57.78 | 45.39 |
| Bra012970.1-P | Field mustard | cytosol | 64.13 | 45.19 |
| CDY23071 | Canola | cytosol | 65.71 | 44.81 |
| CDY02157 | Canola | cytosol | 65.71 | 44.81 |
| KRH28040 | Soybean | peroxisome, plastid | 46.35 | 31.95 |
| KRH20786 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 43.17 | 30.98 |
| KRH30009 | Soybean | endoplasmic reticulum, mitochondrion | 42.54 | 30.25 |
| VIT_17s0000g06780.t01 | Wine grape | cytosol, peroxisome, plastid | 75.24 | 22.23 |
Protein Annotations
| Gene3D:3.50.50.60 | MapMan:35.1 | UniProt:A0A0R0JJE3 | EMBL:ACUP02003550 | EMBL:ACUP02003551 | EMBL:ACUP02003552 |
| InterPro:FAD/NAD-bd_sf | InterPro:Flavin_mOase-like | EnsemblPlantsGene:GLYMA_06G198100 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004497 | GO:GO:0004499 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0050660 | GO:GO:0050661 | GO:GO:0055114 |
| InterPro:IPR036188 | EnsemblPlants:KRH54615 | ProteinID:KRH54615 | ProteinID:KRH54615.1 | PFAM:PF00743 | PFAM:PF13450 |
| PRINTS:PR00419 | PANTHER:PTHR23023 | PANTHER:PTHR23023:SF86 | SUPFAM:SSF51905 | UniParc:UPI0006ED6271 | : |
Description
hypothetical protein
Coordinates
chr6:-:18000036..18003910
Molecular Weight (calculated)
36001.8 Da
IEP (calculated)
6.148
GRAVY (calculated)
-0.430
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSETLQSQT KNVCVVGAGP SGLVAARELR KEGHSVALLE QNHDVGGQWL YELNVEGEDP LGKKPFLKVH SSIYESLRLT SPHKKSEKTV EEVFDAVVVA
101: TGHYSQPRLP SIQGMDTWKR KQMHSHIYRT PEPFRNEVYD MYSYAFPFLD TKGMVVVDDD RVGPLYEHTF PPSLAPSLSF IGIPRKIIGF PFFESQAIWI
201: AQLLSGKRVL PSWEEMMKSI KEFYHSREAA GIPKHCTHEI ANFEFSLHLQ YCDKYGDNVG FPRIEEWRKQ LCLSALINSD ANLETYRDSW DDHELLKEAL
301: QSPHFTQLGL EDSPM
101: TGHYSQPRLP SIQGMDTWKR KQMHSHIYRT PEPFRNEVYD MYSYAFPFLD TKGMVVVDDD RVGPLYEHTF PPSLAPSLSF IGIPRKIIGF PFFESQAIWI
201: AQLLSGKRVL PSWEEMMKSI KEFYHSREAA GIPKHCTHEI ANFEFSLHLQ YCDKYGDNVG FPRIEEWRKQ LCLSALINSD ANLETYRDSW DDHELLKEAL
301: QSPHFTQLGL EDSPM
001: MATSHPDPTT SRHVAVIGAG AAGLVAAREL RREGHSVVVL ERGSQIGGVW AYTSQVEPDP LSLDPTRPVV HSSLYRSLRT NIPRECMGFT DFPFATRPHD
101: GSRDPRRHPA HTEVLAYLRD FAKEFDIEEM VRFETEVVKA EQVAAEGEER GKWRVESRSS DGVVDEIYDA VVVCNGHYTE PRHALITGID SWPGKQIHSH
201: NYRVPDQFKD QVVIVIGSSA SGVDICRDIA QVAKEVHVSS RSTSPDTYEK LTGYENLWLH STIQIAREDG SVVFENGKTI YADTIMHCTG YKYYFPFLDT
301: KGEVTVDDNR VGPLYKHVFP PALAPSLSFI GLPWQITPFP MFELQSKWVA AVLSGRVSLP SQDEMMEDTK AFYDKLEASG IPKRYTHLMP DDSQFEYDNW
401: LADQCEYPRI EKWREQMFYI GFKRIYAQSS TYRDNWDDDH LIVEAYDDFV KFMSSYQELL PMLKT
101: GSRDPRRHPA HTEVLAYLRD FAKEFDIEEM VRFETEVVKA EQVAAEGEER GKWRVESRSS DGVVDEIYDA VVVCNGHYTE PRHALITGID SWPGKQIHSH
201: NYRVPDQFKD QVVIVIGSSA SGVDICRDIA QVAKEVHVSS RSTSPDTYEK LTGYENLWLH STIQIAREDG SVVFENGKTI YADTIMHCTG YKYYFPFLDT
301: KGEVTVDDNR VGPLYKHVFP PALAPSLSFI GLPWQITPFP MFELQSKWVA AVLSGRVSLP SQDEMMEDTK AFYDKLEASG IPKRYTHLMP DDSQFEYDNW
401: LADQCEYPRI EKWREQMFYI GFKRIYAQSS TYRDNWDDDH LIVEAYDDFV KFMSSYQELL PMLKT
Arabidopsis Description
Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178W1K3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.