CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
peroxisome 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH02720
KRH19149

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	KRH02720	AT2G19560.1	19843313
AT5G61290.1	KRH19149	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54615	Soybean	cytosol	64.49	93.97
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	76.91	77.58
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	76.69	77.53
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	76.03	76.7
KRH56870	Soybean	cytosol, nucleus, peroxisome	76.03	76.37
KRH56869	Soybean	cytosol	76.69	76.36
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	71.46	72.41
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	70.81	71.74
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	71.46	71.46
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	71.68	71.37
CDY40773	Canola	mitochondrion	71.24	71.24
Bra028683.1-P	Field mustard	mitochondrion	71.24	71.24
AT5G07800.1	Thale cress	cytosol	71.02	70.87
KRH56868	Soybean	cytosol, peroxisome, plastid	57.08	70.81
Bra012971.1-P	Field mustard	cytosol	70.37	70.22
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	17.43	70.18
CDY02158	Canola	cytosol	60.78	69.58
CDY23072	Canola	cytosol	60.35	69.08
AT5G61290.1	Thale cress	cytosol	69.28	68.98
Bra012970.1-P	Field mustard	cytosol	66.45	68.23
CDY02157	Canola	cytosol	67.54	67.1
CDY23071	Canola	cytosol	67.1	66.67
KRH28040	Soybean	peroxisome, plastid	46.62	46.83
KRH20786	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.27	44.19
KRH30009	Soybean	endoplasmic reticulum, mitochondrion	42.48	44.02
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	76.69	33.02

Protein Annotations

EntrezGene:100795136	Gene3D:3.50.50.60	MapMan:35.1	UniProt:A0A0R0KDY6	EMBL:ACUP02002656	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	EnsemblPlantsGene:GLYMA_04G165000	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	EnsemblPlants:KRH63273	ProteinID:KRH63273
ProteinID:KRH63273.1	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86
SUPFAM:SSF51905	UniParc:UPI00019D346E	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:41246946..41250808

Molecular Weight (calculated)

52237.3 Da

IEP (calculated)

5.828

GRAVY (calculated)

-0.320

Length

459 amino acids

Sequence
(BLAST)

001: MVSETLQSQT KNVCVIGAGP SGLVAARELR KEGHRVVLLE QNHDVGGQWL YESNVEGEDP LGKKPFLKVH SSIYESLRLT SPREIMGFTD FPFLVKKGRD
101: MRRFPSHTEL LMYLRDFCEH FGLGEMIRFN TRVDYVGMLD YGVCSNDLKW VVRSEDKKSE KTVEEVFDAV VVATGHYSQP RLPSIQGMDT WKRKQMHSHI
201: YRTPEPFRNE IVVVVGNSLS GQDISIELVD VAKEVHMSSR SLNISEGLSK VISKHANFHL HPQIETLQED GRVTFVDGSS ILADSILYCT GYSYAFPFLD
301: TKEMVVVDDD RVGPLYEHTF PPSLAPSLSF IGIPRKIIGF PFFESQAIWI AQLLSGKKVL PSWEEMMKSI KEFYQSREAA GIPKHCTHEI ANFGYCDKYG
401: DNVGFPRIEE WRKQLCLSAL INSDANLETY RDSWDDHELL QEALQSPHFT QLGLEDSPM

Best Arabidopsis Sequence Match ( AT5G07800.1 )
(BLAST)

001: MVTFTSEASR SRSKKVCVIG AGPAGLVSAR ELRKEGHKVV VLEQNEDVGG QWFYQPNVEE EDPLGRSSGS INGELKVHSS IYSSLRLTSP REIMGYSDFP
101: FLAKKGRDMR RFPGHKELWL YLKDFSEAFG LREMIRFNVR VEFVGEKEEE DDVKKWIVRS REKFSGKVME EIFDAVVVAT GHYSHPRLPS IKGMDSWKRK
201: QIHSHVYRVP DPFRNEVVVV VGNSMSGQDI SMELVEVAKE VHLSAKTLDI SSGLSKVISK HPNLLIHPQI ESLEDDGKVI FVDGSWVVAD TILYCTGYSY
301: KFPFLESKGR IEVDDDRVGP LFEHTFPPCL SPSLSFVGIP RKLIGFPFFE AQAKWIAQVL SGKSSLPSPD QMLQSVDEFY RSRDLAGVPK HNTHDIADFT
401: YCDKYADYVG FPHLEDWRKL LCLSALNNSQ ENLETYRDSW DDHELLQEAL QSSHFTNFNS

Arabidopsis Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.