CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

nucleus 1
mitochondrion 2
peroxisome 2
plastid 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0233g00120.t01	Wine grape	cytosol, peroxisome, vacuole	19.69	73.17
Bra036655.1-P	Field mustard	plastid	14.88	66.67
VIT_02s0154g00190.t01	Wine grape	cytosol	64.11	64.11
VIT_00s0233g00180.t01	Wine grape	cytosol	63.9	63.9
AT1G62600.1	Thale cress	mitochondrion, plastid	61.71	62.39
Bra027033.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	49.67	62.36
AT1G62620.1	Thale cress	cytosol	61.27	62.22
GSMUA_Achr11P...	Banana	plastid	58.21	62.15
CDY68139	Canola	mitochondrion	61.05	62.14
VIT_02s0154g00170.t01	Wine grape	vacuole	61.27	62.08
CDY31816	Canola	plastid	60.83	62.05
AT1G63370.1	Thale cress	plastid	61.05	62.0
Zm00001d029865_P001	Maize	mitochondrion	59.52	61.82
VIT_00s0233g00130.t01	Wine grape	plastid	28.45	61.61
TraesCS1A01G210600.1	Wheat	cytosol	48.36	60.88
PGSC0003DMT400035866	Potato	cytosol, peroxisome, plastid	60.61	60.88
EER91959	Sorghum	mitochondrion	59.08	60.67
CDY31817	Canola	cytosol	34.14	60.0
PGSC0003DMT400043245	Potato	cytosol, peroxisome, plastid	59.74	59.87
CDY68140	Canola	plastid	54.92	59.48
VIT_02s0154g00180.t01	Wine grape	cytosol, peroxisome, vacuole	59.08	59.34
Bra027032.1-P	Field mustard	cytosol	54.7	59.24
Solyc06g060610.2.1	Tomato	mitochondrion	61.49	58.91
VIT_02s0154g00160.t01	Wine grape	cytosol, peroxisome	56.46	58.9
CDY39802	Canola	plastid	16.19	58.27
HORVU4Hr1G031220.3	Barley	mitochondrion, peroxisome	33.26	57.79
CDY03270	Canola	cytosol	45.08	57.7
AT1G12200.1	Thale cress	cytosol	58.64	57.63
AT1G12140.1	Thale cress	mitochondrion	57.33	57.08
OQU92170	Sorghum	cytosol	45.95	56.91
CDY26543	Canola	plastid	57.77	56.9
CDY15973	Canola	plastid	57.77	56.9
Bra026986.1-P	Field mustard	plastid	57.55	56.68
CDY31244	Canola	plastid	55.36	56.47
CDY72131	Canola	cytosol	36.32	56.46
Os10t0553800-01	Rice	peroxisome	59.52	56.43
CDX98082	Canola	cytosol	36.32	56.27
CDY21037	Canola	plastid	55.14	56.25
Bra019747.1-P	Field mustard	cytosol	57.11	56.25
VIT_00s0233g00170.t01	Wine grape	cytosol	30.63	56.0
HORVU1Hr1G053900.1	Barley	cytosol, peroxisome	59.52	55.85
AT1G63340.1	Thale cress	plastid	51.64	55.66
CDY27695	Canola	plastid	29.32	55.6
AT1G62570.1	Thale cress	cytosol	55.58	55.1
TraesCS5A01G536300.1	Wheat	cytosol	10.72	55.06
GSMUA_Achr2P18520_001	Banana	cytosol	45.73	55.0
TraesCS1B01G224600.2	Wheat	cytosol	59.74	54.93
Bra026988.1-P	Field mustard	plastid	55.14	54.9
CDY15969	Canola	plastid	54.92	54.68
Bra027035.1-P	Field mustard	plastid	55.14	54.66
CDY26541	Canola	plastid	54.7	54.47
CDY31813	Canola	plastid	54.92	54.45
TraesCS5A01G536600.1	Wheat	cytosol, peroxisome, plastid	39.39	54.38
TraesCS1D01G213900.2	Wheat	peroxisome	58.86	54.23
CDY12955	Canola	extracellular, plastid	54.92	54.21
CDX98777	Canola	cytosol, peroxisome, plasma membrane	32.82	53.76
AT1G62560.1	Thale cress	plastid	54.27	53.68
HORVU4Hr1G087900.7	Barley	cytosol, peroxisome	45.51	53.61
AT1G65860.1	Thale cress	cytosol, extracellular, plastid	53.83	53.59
AT1G63390.1	Thale cress	mitochondrion	19.69	53.57
TraesCS4B01G370200.1	Wheat	mitochondrion	54.05	53.35
AT1G62580.1	Thale cress	cytosol, plastid	57.77	53.12
Bra016787.1-P	Field mustard	plastid	55.14	53.05
TraesCS4D01G361000.1	Wheat	cytosol	53.39	52.93
TraesCS6D01G139800.1	Wheat	mitochondrion	52.08	52.89
TraesCS4B01G370400.1	Wheat	mitochondrion	54.49	52.75
TraesCS4B01G370500.1	Wheat	mitochondrion	51.2	52.7
HORVU1Hr1G091130.12	Barley	cytosol, mitochondrion, peroxisome, plastid	54.27	52.65
KRH20786	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	50.55	52.62
AT1G12160.1	Thale cress	cytosol, mitochondrion	53.83	52.56
HORVU7Hr1G027520.8	Barley	endoplasmic reticulum, extracellular, golgi	35.89	52.4
KRH30009	Soybean	endoplasmic reticulum, mitochondrion	50.77	52.37
AT1G12130.1	Thale cress	plastid	53.83	52.34
TraesCS4B01G366800.1	Wheat	plastid	53.39	52.25
VIT_18s0075g00690.t01	Wine grape	cytosol	11.6	51.96
HORVU6Hr1G029800.7	Barley	mitochondrion	47.05	51.93
AT1G62540.2	Thale cress	cytosol	54.7	51.87
TraesCS4D01G360900.1	Wheat	cytosol	54.27	51.35
Zm00001d027286_P001	Maize	cytosol	42.45	50.65
KXG40414	Sorghum	cytosol	42.67	50.65
TraesCS4D01G360800.1	Wheat	cytosol	35.23	50.63
TraesCS5A01G534500.1	Wheat	cytosol	52.08	50.53
KRH63273	Soybean	cytosol, peroxisome, plastid	46.83	46.62
KRH54615	Soybean	cytosol	31.95	46.35
TraesCS5A01G536500.2	Wheat	cytosol, endoplasmic reticulum, plastid	53.83	46.15
HORVU6Hr1G094480.7	Barley	plastid	36.1	45.96
TraesCS6A01G150100.1	Wheat	mitochondrion	18.38	45.9
HORVU6Hr1G061340.1	Barley	mitochondrion	19.26	45.36
KRH56869	Soybean	cytosol	44.86	44.47
KRH56870	Soybean	cytosol, nucleus, peroxisome	44.2	44.2
KRH56868	Soybean	cytosol, peroxisome, plastid	34.35	42.43
HORVU2Hr1G026400.29	Barley	cytosol	12.69	42.34
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	9.41	37.72
Zm00001d046637_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	9.63	36.36

Protein Annotations

EntrezGene:100793203	Gene3D:3.50.50.60	MapMan:35.1	EMBL:ACUP02006738	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase
InterPro:Flavin_mOase-like	EnsemblPlantsGene:GLYMA_11G031100	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	UniProt:I1LGN1	InterPro:IPR036188	EnsemblPlants:KRH28040	ProteinID:KRH28040
ProteinID:KRH28040.1	ProteinID:KRH28041.1	ProteinID:KRH28042.1	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00370
PANTHER:PTHR23023	PANTHER:PTHR23023:SF198	SUPFAM:SSF51905	UniParc:UPI00023CDC22	SEG:seg	:

Description

hypothetical protein

Coordinates

chr11:-:2238870..2244892

Molecular Weight (calculated)

51665.2 Da

IEP (calculated)

5.945

GRAVY (calculated)

-0.323

Length

457 amino acids

Sequence
(BLAST)

001: MACEVPIKSM MSSAVTLLTP RHVAVIGAGA AGLVAARELR REGHRVVVFE KGEEVGGMWV YSPEVDSDPL GLEAKRRLVH SSLYDSLRTN LSRESMSFRD
101: YPFRRREGKG RDSRRFPGHR EVLLYLQDFA AEFEIGELVR FGTEVLFAGL DQCGKWRLTS TSPHTHPVDE IYDALIICNG HYVQPRLPHI PGINAWPGKQ
201: MHSHNYRTPE PFQDQVVVLI GSSASAVDIS RDIATVAKEV HIAARSVEED KLGKVPGHEN MWLHSMIDSV HEDGTVVFQD GNAVGADFII HCTGYKYDFP
301: FLETNGEVTV DDNRVGPLYK HVFPPALAPW LSFVGLPWKV APFSLFELQS KWIAGILSNR IALPSKEEMA KDVDAFYSSL EASGTPKRYT HNMGILQWDY
401: NNWIADQCGV PSIEEWRRQM YIATSKNRVL RPESYRDEWD DDDLVLQAQQ DFANYLT

Best Arabidopsis Sequence Match ( AT1G62620.1 )
(BLAST)

001: MAPALSPTRS HHVAVIGAGP AGLVAARELR REGHSVVVFE KQKQVGGTWI YTDEVESDPL SVDPTRSVVH SSVYRSLRIN GTRECTGYRD FPFVVRSGVS
101: RDPRRFPSHG EVLAYLKDFA KEFGIEEMVR FETEVVKVSP AAEEGIGKWR IESTEKEKKV RRDEIYDAVV VCNGHYVEPR LAQIPGISSW PGKEMHSHNY
201: RIPEPFRDKV VVLIGNSSSA EDISRDIARV AKEVHVACRS NPADTFIKQT GYNNLWTHSM IESVHEDGSV VYQNGKTISV DIIMHCTGYK YHFPFLDTNG
301: IVTVDDNRVG PLYKDVFPPA FAPWLSFIGI PWQVLPFPMF ELQSKWIAGV LSGRIPLPSK EDMMIEIKTF YSTLEVQGIP KRYTHRMGNT QFEYYNWLAS
401: QCGCSETEEW RKEMCLANGV RKEAHPETYR DEWDDHHLVS EAYQDFSLYS

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.