Factsheet for TraesCS1D01G213900.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G210600.1	Wheat	cytosol	70.97	96.97
TraesCS1B01G224600.2	Wheat	cytosol	95.16	94.97
HORVU1Hr1G053900.1	Barley	cytosol, peroxisome	90.12	91.79
HORVU4Hr1G031220.3	Barley	mitochondrion, peroxisome	44.15	83.27
EER91959	Sorghum	mitochondrion	74.6	83.15
Zm00001d029865_P001	Maize	mitochondrion	73.39	82.73
OQU92170	Sorghum	cytosol	57.86	77.78
HORVU7Hr1G027520.8	Barley	endoplasmic reticulum, extracellular, golgi	48.79	77.32
Os10t0553800-01	Rice	peroxisome	74.4	76.56
GSMUA_Achr11P...	Banana	plastid	57.26	66.36
TraesCS4D01G361000.1	Wheat	cytosol	56.25	60.52
TraesCS6D01G139800.1	Wheat	mitochondrion	54.64	60.22
VIT_00s0233g00130.t01	Wine grape	plastid	25.6	60.19
CDY31816	Canola	plastid	53.63	59.38
VIT_00s0233g00180.t01	Wine grape	cytosol	54.64	59.3
GSMUA_Achr2P18520_001	Banana	cytosol	45.36	59.21
VIT_02s0154g00190.t01	Wine grape	cytosol	54.44	59.08
KRH28040	Soybean	peroxisome, plastid	54.23	58.86
CDY68139	Canola	mitochondrion	53.23	58.8
Bra027033.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	43.15	58.79
VIT_00s0233g00120.t01	Wine grape	cytosol, peroxisome, vacuole	14.52	58.54
PGSC0003DMT400035866	Potato	cytosol, peroxisome, plastid	53.63	58.46
TraesCS4D01G360900.1	Wheat	cytosol	56.25	57.76
CDY31817	Canola	cytosol	30.24	57.69
TraesCS4D01G360800.1	Wheat	cytosol	36.69	57.23
Bra036655.1-P	Field mustard	plastid	11.69	56.86
AT1G62600.1	Thale cress	mitochondrion, plastid	51.81	56.86
VIT_02s0154g00170.t01	Wine grape	vacuole	51.41	56.54
CDY72131	Canola	cytosol	33.47	56.46
AT1G63370.1	Thale cress	plastid	51.21	56.44
AT1G62620.1	Thale cress	cytosol	51.21	56.44
CDX98082	Canola	cytosol	33.47	56.27
Solyc06g060610.2.1	Tomato	mitochondrion	53.83	55.97
CDY26543	Canola	plastid	52.22	55.82
Bra026986.1-P	Field mustard	plastid	52.22	55.82
AT1G12200.1	Thale cress	cytosol	52.22	55.7
CDY15973	Canola	plastid	52.02	55.6
Bra019747.1-P	Field mustard	cytosol	52.02	55.6
Bra027032.1-P	Field mustard	cytosol	47.18	55.45
CDY68140	Canola	plastid	47.18	55.45
PGSC0003DMT400043245	Potato	cytosol, peroxisome, plastid	50.6	55.04
CDY31244	Canola	plastid	49.6	54.91
Bra026988.1-P	Field mustard	plastid	50.4	54.47
VIT_02s0154g00180.t01	Wine grape	cytosol, peroxisome, vacuole	49.8	54.29
AT1G12140.1	Thale cress	mitochondrion	50.2	54.25
CDY15969	Canola	plastid	50.2	54.25
CDY21037	Canola	plastid	48.99	54.24
CDY26541	Canola	plastid	49.8	53.81
AT1G63340.1	Thale cress	plastid	45.36	53.07
VIT_02s0154g00160.t01	Wine grape	cytosol, peroxisome	46.77	52.97
CDY27695	Canola	plastid	25.6	52.7
CDY39802	Canola	plastid	13.31	51.97
CDY03270	Canola	cytosol	37.3	51.82
Bra027035.1-P	Field mustard	plastid	47.78	51.41
Bra016787.1-P	Field mustard	plastid	49.19	51.37
CDY31813	Canola	plastid	47.58	51.19
CDY12955	Canola	extracellular, plastid	47.58	50.97
AT1G62580.1	Thale cress	cytosol, plastid	50.81	50.7
AT1G62570.1	Thale cress	cytosol	46.77	50.33
AT1G65860.1	Thale cress	cytosol, extracellular, plastid	46.37	50.11
VIT_00s0233g00170.t01	Wine grape	cytosol	25.2	50.0
AT1G62560.1	Thale cress	plastid	46.17	49.57
CDX98777	Canola	cytosol, peroxisome, plasma membrane	27.62	49.1
VIT_18s0075g00690.t01	Wine grape	cytosol	10.08	49.02
AT1G62540.2	Thale cress	cytosol	46.98	48.34
AT1G12130.1	Thale cress	plastid	45.56	48.09
AT1G63390.1	Thale cress	mitochondrion	16.13	47.62
AT1G12160.1	Thale cress	cytosol, mitochondrion	44.15	46.79
TraesCS6D01G110500.1	Wheat	cytosol	40.52	42.14
TraesCS7D01G425900.1	Wheat	cytosol	39.31	40.04
TraesCS6D01G110300.1	Wheat	cytosol	40.32	39.76
TraesCS4D01G269000.1	Wheat	cytosol	38.51	38.43
TraesCS1D01G214400.1	Wheat	peroxisome	38.71	37.72
TraesCS3D01G000800.1	Wheat	cytosol	37.3	35.85

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF199	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS1D01G213900	EnsemblPlants:TraesCS1D01G213900.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:298948405..298951013

Molecular Weight (calculated)

55000.8 Da

IEP (calculated)

5.614

GRAVY (calculated)

-0.334

Length

496 amino acids

Sequence
(BLAST)

001: MNETNRDGIA HGSSTEKRPA EARRIQANSG SQLRKPLCSL LPASMPSPSL RLAVVGAGAA GLAAARELRR EGHAPVVFER AAAVGGTWLY ASPAPAAAAD
101: PLGAAATHSS LYASLRTNLP REVMGFLDFP FTAARGSVVD ARRFPGHQEV LRYLEDFTQR FDLYGLVRFQ TEVVGVRREA GGRWAVTSRK LGEKGEQDEE
201: LYDAVVVCNG HYSEPRVASI PGDLYFPTLT GADAWPGKQM HSHNYRVPEP FLDQVVIVIG ASASAVDISR DIASVAKEVH IADRSAPTST CEQQPEYDNM
301: WLHSMIDHAQ GDGTVVFQDG SSIKADVIMH CTGYLYDFPF LGDDSTITVD DNCVDPLYKH VFPIEVAPDL SFIGVPWKVI PFPLVELQSK WVAGILSGRI
401: KLPSKDEMME DVKAIYSRLE TRGWPKRYTH NFSGGYQFEY DDWLAEQCGH PPIEEWRKLM YAANAKNKAA RPERYRDEWD DDGLVALANE DFKKYF

Best Arabidopsis Sequence Match ( AT1G12140.3 )
(BLAST)

001: MAPARTRVNS LNVAVIGAGA AGLVAARELR RENHTVVVFE RDSKVGGLWV YTPNSEPDPL SLDPNRTIVH SSVYDSLRTN LPRECMGYRD FPFVPRPEDD
101: ESRDSRRYPS HREVLAYLED FAREFKLVEM VRFKTEVVLV EPEDKKWRVQ SKNSDGISKD EIFDAVVVCN GHYTEPRVAH VPGIDSWPGK QIHSHNYRVP
201: DQFKDQVVVV IGNFASGADI SRDITGVAKE VHIASRSNPS KTYSKLPGSN NLWLHSMIES VHEDGTIVFQ NGKVVQADTI VHCTGYKYHF PFLNTNGYIT
301: VEDNCVGPLY EHVFPPALAP GLSFIGLPWM TLQFFMFELQ SKWVAAALSG RVTLPSEEKM MEDVTAYYAK REAFGQPKRY THRLGGGQVD YLNWIAEQIG
401: APPGEQWRYQ EINGGYYRLA TQSDTFRDKW DDDHLIVEAY EDFLRQKLIS SLPSQLLES

Arabidopsis Description

FMOGS-OX5Flavin-containing monooxygenase FMO GS-OX5 [Source:UniProtKB/Swiss-Prot;Acc:A8MRX0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.