Factsheet for TraesCS3D01G000800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G010900.1	Wheat	cytosol	91.67	94.22
TraesCSU01G045200.2	Wheat	cytosol	89.53	89.19
TraesCS3B01G014100.2	Wheat	cytosol	89.53	89.19
TraesCS4D01G269000.1	Wheat	cytosol	79.65	82.7
TraesCS6D01G110500.1	Wheat	cytosol	64.73	70.02
TraesCS6D01G110300.1	Wheat	cytosol	65.12	66.8
TraesCS7D01G425900.1	Wheat	cytosol	56.4	59.75
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	48.84	55.38
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	48.64	55.16
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	47.67	54.19
Bra012970.1-P	Field mustard	cytosol	45.74	52.8
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	45.74	51.42
Bra012971.1-P	Field mustard	cytosol	45.74	51.3
CDY02157	Canola	cytosol	45.93	51.3
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	44.96	51.21
AT5G07800.1	Thale cress	cytosol	45.54	51.09
CDY23071	Canola	cytosol	45.74	51.08
Bra028683.1-P	Field mustard	mitochondrion	45.35	50.98
CDY40773	Canola	mitochondrion	45.35	50.98
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	44.57	50.77
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	45.16	50.54
CDY02158	Canola	cytosol	39.15	50.37
CDY23072	Canola	cytosol	38.95	50.12
AT5G61290.1	Thale cress	cytosol	44.57	49.89
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	10.85	49.12
TraesCS4D01G360800.1	Wheat	cytosol	27.13	44.03
TraesCS4D01G361000.1	Wheat	cytosol	37.79	42.3
TraesCS6D01G139800.1	Wheat	mitochondrion	36.43	41.78
TraesCS4D01G360900.1	Wheat	cytosol	36.82	39.34
TraesCS1D01G213900.2	Wheat	peroxisome	35.85	37.3
TraesCS1D01G214400.1	Wheat	peroxisome	30.62	31.04
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	47.67	23.08

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS3D01G000800	EnsemblPlants:TraesCS3D01G000800.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:494225..496329

Molecular Weight (calculated)

56956.5 Da

IEP (calculated)

6.611

GRAVY (calculated)

-0.331

Length

516 amino acids

Sequence
(BLAST)

001: MDTACGSKPP QSKKVCVIGA GMAGLAAALE LRREGHDVTV LEQSGDIGGQ WLYDPRTDAD DALGVAAPVK VHSSIYASLR LISPRQTTGF TDFPFCPKSG
101: RDDRRFPGHR EVHLYLKDFC DAFGLMEAVR LNTRVLRAAM TPARKWAVRS MDLGLGERDG ANGKGLDAYV DEVFDAVVVA TGHYSQPRLP IIKGMEAWRG
201: RQMHSHSYRV PEPFRGEVVV VVGCGDSGRD IAMEIRGVAK EVYMVAGSME AVTPGLSKVL AKHSANLHLR LEVERLCEDG RVAFKDGGGS SSSIAADTVI
301: YCTGYNYSFP FLDTGGAVAV DDNRVGPLFE HVFPPSLAPS LSFVGLLRKV FAPRSFEAQA RWVAQVLSGR RKLPTEEEML RSVEELYRAR EIAGVPSKYT
401: HEVRSLKCSY VDDFGEKYCD FPRQERWQYE LLRSTVHDMM DKFETFRDDY QDSNSIGKAV QEWHLSCLHS SSMAGSEVSG AGAKREAGAS KYEHQNDIFH
501: CVDTSVSAAT NMDQKE

Best Arabidopsis Sequence Match ( AT1G12200.1 )
(BLAST)

001: MATSHPDPTT SRHVAVIGAG AAGLVAAREL RREGHSVVVL ERGSQIGGVW AYTSQVEPDP LSLDPTRPVV HSSLYRSLRT NIPRECMGFT DFPFATRPHD
101: GSRDPRRHPA HTEVLAYLRD FAKEFDIEEM VRFETEVVKA EQVAAEGEER GKWRVESRSS DGVVDEIYDA VVVCNGHYTE PRHALITGID SWPGKQIHSH
201: NYRVPDQFKD QVVIVIGSSA SGVDICRDIA QVAKEVHVSS RSTSPDTYEK LTGYENLWLH STIQIAREDG SVVFENGKTI YADTIMHCTG YKYYFPFLDT
301: KGEVTVDDNR VGPLYKHVFP PALAPSLSFI GLPWQITPFP MFELQSKWVA AVLSGRVSLP SQDEMMEDTK AFYDKLEASG IPKRYTHLMP DDSQFEYDNW
401: LADQCEYPRI EKWREQMFYI GFKRIYAQSS TYRDNWDDDH LIVEAYDDFV KFMSSYQELL PMLKT

Arabidopsis Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178W1K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.