Factsheet for TraesCS3A01G010900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G000800.1	Wheat	cytosol	94.22	91.67
TraesCSU01G045200.2	Wheat	cytosol	92.23	89.38
TraesCS3B01G014100.2	Wheat	cytosol	92.23	89.38
TraesCS6A01G150700.1	Wheat	cytosol	58.76	70.74
TraesCS6A01G120500.2	Wheat	cytosol	66.14	68.88
TraesCS5A01G522900.1	Wheat	cytosol	55.38	55.94
TraesCS5A01G298300.1	Wheat	cytosol	54.58	55.8
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	49.8	54.95
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	49.8	54.95
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	49.0	54.19
Bra012970.1-P	Field mustard	cytosol	48.01	53.91
CDY02157	Canola	cytosol	48.41	52.6
CDY23071	Canola	cytosol	48.21	52.38
Bra012971.1-P	Field mustard	cytosol	47.81	52.17
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	47.41	51.85
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	46.61	51.66
AT5G07800.1	Thale cress	cytosol	47.21	51.52
Bra028683.1-P	Field mustard	mitochondrion	47.01	51.42
CDY40773	Canola	mitochondrion	47.01	51.42
CDY02158	Canola	cytosol	41.04	51.37
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	46.22	51.21
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	47.01	51.19
CDY23072	Canola	cytosol	40.84	51.12
AT5G61290.1	Thale cress	cytosol	46.41	50.54
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	10.96	48.25
TraesCS5A01G536600.1	Wheat	cytosol, peroxisome, plastid	28.88	43.81
TraesCS6A01G150100.1	Wheat	mitochondrion	15.74	43.17
TraesCS1A01G210600.1	Wheat	cytosol	30.08	41.6
TraesCS1A01G211100.1	Wheat	peroxisome	37.05	41.06
TraesCS5A01G534500.1	Wheat	cytosol	37.85	40.34
TraesCS5A01G536500.2	Wheat	cytosol, endoplasmic reticulum, plastid	39.24	36.96
TraesCS5A01G536300.1	Wheat	cytosol	4.38	24.72
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	49.0	23.08

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS3A01G010900	EnsemblPlants:TraesCS3A01G010900.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:9064646..9066678

Molecular Weight (calculated)

55452.7 Da

IEP (calculated)

6.786

GRAVY (calculated)

-0.365

Length

502 amino acids

Sequence
(BLAST)

001: MDTACGSKPP QSKKVCVIGA GMAGLAAARE LRREGHDVTL LEQSGDVGGQ WLYDPRTDAD DALGVAAPVK VHSSIYASLR LISPRQTTGF TDFPFCPKSG
101: RDGRRFPGHR EVHLYLKDFC HAFGLMEAVR LNTRVLRASM TPARKWAVRS MDLGLGECAG ANGKELDAYV DEVFDAVVVA TGHYSQPRLP SIKGMETWRG
201: RQMHSHSYRV PEPFRGEVVV VVGCGDSGRD IAMEIRGVAK EVYIVAGSME AVTPGLSKVL AKHSANLHLR LEVERLCEDG RVVFKDGGGS SSSIAADTVI
301: YCTGYNYSFP FLETGGAVAV DDNRVGPLFE HVFPPSLAPS LSFIGLLRKV FAPRSFEAQA RWVAQVLSGR RKLPTEEEML RSVEEFYRAK EIAGVPSKYT
401: HEVGSLKCSY VDDFGEKYCD FPRQERWQYE LLRSTVHDMV DKFETFRDDY QDSDSIGKAV QEWHLSCLNS SSKAGSEVSR AGAKPEPGAS KYEHQNDMDR
501: SE

Best Arabidopsis Sequence Match ( AT1G62560.1 )
(BLAST)

001: MAPAQNQITS KHVAVIGAGP AGLITSRELR REGHSVVVFE REKQVGGLWV YTPKSDSDPL SLDPTRSKVH SSIYESLRTN VPRESMGVRD FPFLPRFDDE
101: SRDARRYPNH REVLAYIQDF AREFKIEEMI RFETEVVRVE PVDNGNWRVQ SKNSGGFLED EIYDAVVVCN GHYTEPNIAH IPGIKSWPGK QIHSHNYRVP
201: DPFENEVVVV IGNFASGADI SRDIAKVAKE VHIASRAREP HTYEKISVPQ NNLWMHSEID TTHEDGSIVF KNGKVIFADS IVYCTGYKYN FPFLETNGYL
301: RIDEKRVEPL YKHVFPPALA PGLAFVGLPA MGIVFVMFEI QSKWVAAVLS GRVTLPSTDK MMEDINAWYA SLDALGIPKR HTHTIGRIQS EYLNWVAKES
401: GCELVERWRG QEVDGGYLRL VAHPETYRDE WDDDELIEEA YNDFSRKKLI SVDPSYYLEN GR

Arabidopsis Description

FMOGS-OX3Flavin-containing monooxygenase FMO GS-OX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXE1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.