Factsheet for TraesCS1A01G211100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029924_P001	Maize	mitochondrion	70.42	73.5
EER94515	Sorghum	cytosol	70.2	72.94
KXG38945	Sorghum	mitochondrion	69.98	72.87
TraesCS1D01G214400.1	Wheat	peroxisome	81.02	72.1
OQU92163	Sorghum	mitochondrion	69.54	72.08
KXG38941	Sorghum	mitochondrion	68.43	71.26
Zm00001d029922_P001	Maize	mitochondrion	59.82	56.58
Solyc05g050920.2.1	Tomato	cytosol	46.8	50.24
Solyc06g062310.2.1	Tomato	cytosol	21.19	49.48
KRH30009	Soybean	endoplasmic reticulum, mitochondrion	47.68	48.76
Solyc05g050910.2.1	Tomato	cytosol, nucleus, peroxisome	46.36	48.39
KRH20786	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.8	48.29
TraesCS6A01G150100.1	Wheat	mitochondrion	18.54	45.9
VIT_13s0019g00660.t01	Wine grape	mitochondrion	46.36	45.75
TraesCS5A01G534500.1	Wheat	cytosol	47.24	45.44
TraesCS5A01G536600.1	Wheat	cytosol, peroxisome, plastid	33.11	45.32
VIT_13s0019g00620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.25	44.96
TraesCS1A01G210600.1	Wheat	cytosol	35.98	44.9
TraesCS6A01G150700.1	Wheat	cytosol	40.18	43.65
Os10t0554300-00	Rice	cytosol, peroxisome, plastid	46.36	43.39
TraesCS6A01G120500.2	Wheat	cytosol	43.71	41.08
TraesCS5A01G536500.2	Wheat	cytosol, endoplasmic reticulum, plastid	48.12	40.9
VIT_00s0131g00120.t01	Wine grape	cytosol	22.52	39.08
TraesCS5A01G298300.1	Wheat	cytosol	41.06	37.88
TraesCS5A01G522900.1	Wheat	cytosol	41.5	37.83
TraesCS3A01G010900.1	Wheat	cytosol	41.06	37.05
CDY27691	Canola	cytosol	9.93	32.14
TraesCS5A01G536300.1	Wheat	cytosol	6.18	31.46
Solyc06g062320.1.1	Tomato	cytosol	8.39	29.01

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF138	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS1A01G211100	EnsemblPlants:TraesCS1A01G211100.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:374054990..374056868

Molecular Weight (calculated)

50525.9 Da

IEP (calculated)

6.247

GRAVY (calculated)

-0.355

Length

453 amino acids

Sequence
(BLAST)

001: MDRSLQSSPA QEVDRMPPAR AVAVVGAGAA GLVAARELLR EGHAVTVFER SDRVGGTWAY DPRADETDPL GAAVHGSLYA SLRTNLPREL MGFSGHESLV
101: GRVFAGDPRT FPGHQEVLAF LRAFAEESGV ARRVRLRAEV VRAAPPLGRG GESGERWSVA WRGEDGEVAV EAFDAVVVCN GHCTVPLVPK LPGIGKWRGK
201: QMHSHNYRIP EPFRDQIVVV VGLGASGIDI AREISQVTKE VHIASRQNEH RLGKISIDPY LNVWMHAEVD CIQEDGQVRF AEGAAVAADV ILYCTGYRYH
301: FPFLDLDELT VDDENRVGPL YKHVFPPKYA PNLSFVGLPV KTILFQSFEL EAKWVARVLS GRAALPSEEG MLDAVREHYR RMEESGRPRR HTHALMPEWV
401: EYMDWLAEQV GERRLEARRR DIYERALQRV WSLDGGYRDS CEDEEKGSGD SKV

Best Arabidopsis Sequence Match ( AT1G12160.1 )
(BLAST)

001: MTSVITSRAR HVAVIGLGAA GLVAVRELRR EGHTVIGFER EKHVGGLWVY TDRVDSDSVS VDPDRTIVHS SIYQSLRTNL PRECMGYSDF PFVTRSSDGD
101: PRRYPDHREV LMYLQDFAKE FKIEDMIRFE TEVLCVEPSP ENNRKWRVQF KSSNGVSGEE IFDAVVVCNG HFTEPRLAHI PGIESWPGKQ IHSHNYRIPD
201: PFKDEVVIVI GSQASGNDIS TDIATIAKEV HISSKMVASD SYGCYDNLRI HPTIYRARED GSVVFRNGKV VFADAIVHCT GYKYHFPFLK TSGYVTVEDN
301: RVGPLYKHVF PPALAPGISF IGLPFMGLQF FMFEIQSKWV ASVLSGRVKL PAEDKMMEEA VAFYSKLEDL GIPKRYTHFL TDPRGNPMLG TFKPEDAVVI
401: SQSDYFNWIA KQCGCTSIER WRERLYNVAI KKVFFGGDSY RDRWDDDQLI EEVYREFAKL KPNQDCSS

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWW6]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.