Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS5A01G201500.1 | |
| TraesCS5B01G200200.1 | |
| TraesCS5D01G207800.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61290.1 | TraesCS5A01G201500.1 | AT2G19560.1 | 19843313 |
| AT5G61290.1 | TraesCS5B01G200200.1 | AT2G19560.1 | 19843313 |
| AT5G61290.1 | TraesCS5D01G207800.1 | AT2G19560.1 | 19843313 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G178800.1 | Wheat | cytosol | 88.49 | 76.08 |
| TraesCS6A01G120500.2 | Wheat | cytosol | 78.9 | 68.26 |
| TraesCS3A01G010900.1 | Wheat | cytosol | 70.74 | 58.76 |
| Solyc03g115560.2.1 | Tomato | cytosol, peroxisome, plastid | 56.12 | 51.43 |
| PGSC0003DMT400063125 | Potato | cytosol, peroxisome, plastid | 55.88 | 51.21 |
| VIT_17s0000g06790.t01 | Wine grape | cytosol, peroxisome, plastid | 55.4 | 50.88 |
| Bra012970.1-P | Field mustard | cytosol | 53.96 | 50.34 |
| TraesCS5A01G522900.1 | Wheat | cytosol | 59.95 | 50.3 |
| Bra012971.1-P | Field mustard | cytosol | 54.68 | 49.57 |
| CDY23071 | Canola | cytosol | 54.44 | 49.13 |
| CDY02157 | Canola | cytosol | 54.2 | 48.92 |
| TraesCS5A01G298300.1 | Wheat | cytosol | 57.31 | 48.68 |
| CDY14028 | Canola | cytosol, mitochondrion, peroxisome, plastid | 53.48 | 48.58 |
| AT5G07800.1 | Thale cress | cytosol | 53.48 | 48.48 |
| CDY02158 | Canola | cytosol | 46.52 | 48.38 |
| CDY23072 | Canola | cytosol | 46.52 | 48.38 |
| CDY40773 | Canola | mitochondrion | 53.24 | 48.37 |
| Bra028683.1-P | Field mustard | mitochondrion | 53.24 | 48.37 |
| CDX99030 | Canola | cytosol, mitochondrion, peroxisome, plastid | 52.52 | 48.34 |
| CDX69991 | Canola | cytosol, mitochondrion, peroxisome, plastid | 52.28 | 48.12 |
| Bra009308.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 52.76 | 47.72 |
| AT5G61290.1 | Thale cress | cytosol | 52.76 | 47.72 |
| KRH55196 | Soybean | cytosol, mitochondrion, peroxisome | 11.51 | 42.11 |
| TraesCS5A01G536600.1 | Wheat | cytosol, peroxisome, plastid | 32.61 | 41.09 |
| TraesCS6A01G150100.1 | Wheat | mitochondrion | 17.99 | 40.98 |
| TraesCS1A01G211100.1 | Wheat | peroxisome | 43.65 | 40.18 |
| TraesCS1A01G210600.1 | Wheat | cytosol | 34.05 | 39.12 |
| TraesCS5A01G534500.1 | Wheat | cytosol | 42.93 | 38.0 |
| TraesCS5A01G536500.2 | Wheat | cytosol, endoplasmic reticulum, plastid | 44.84 | 35.08 |
| VIT_17s0000g06780.t01 | Wine grape | cytosol, peroxisome, plastid | 55.16 | 21.58 |
| TraesCS5A01G536300.1 | Wheat | cytosol | 3.36 | 15.73 |
Protein Annotations
| Gene3D:3.50.50.60 | MapMan:35.1 | InterPro:FAD/NAD-bd_sf | InterPro:Flavin_mOase | InterPro:Flavin_mOase-like | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004499 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0050660 | GO:GO:0050661 | GO:GO:0055114 | InterPro:IPR036188 | PFAM:PF00743 | PIRSF:PIRSF000332 |
| PRINTS:PR00370 | PANTHER:PTHR23023 | PANTHER:PTHR23023:SF86 | SUPFAM:SSF51905 | EnsemblPlantsGene:TraesCS6A01G150700 | EnsemblPlants:TraesCS6A01G150700.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:134682028..134683491
Molecular Weight (calculated)
46282.5 Da
IEP (calculated)
7.271
GRAVY (calculated)
-0.197
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLASAREL RREGHDVTVL EQNADVGGQW LYDPRSDGAD DPLGAAETVK VHGSLYASLR AISARENMGF TDFHFAPKDG RDGRRFPGHR EVQLYLRDFC
101: DAFGLMEAVR LNTRVLRVAM AVAPTRKWTV RSVHEGTEEE EVFDAVVVAN GHYSQPRLPS IQGMEAWRGR QMHSHSYRVP EPFRGDVVVV VGCGASGKDI
201: AMEVRGVAKE VHLVAKSMEE VTPGLAKVLA KHSANLHLQL HVERLCEDGL VVFGGGGSGV LADTIIYCTG YNYSFPFLHT AGAVTVDDNR VGPLFEHVFP
301: PSLAPSLSFV GIPIKVFAPR FFEAQAKWGA QVLSGRRTLP PEQEMMRSVE EYYRAREIAG VPKKYTHDVC LSETMPTVRT TNLADSLKRG IDYASYLKKE
401: HLSVTYILDR LIFIQRL
101: DAFGLMEAVR LNTRVLRVAM AVAPTRKWTV RSVHEGTEEE EVFDAVVVAN GHYSQPRLPS IQGMEAWRGR QMHSHSYRVP EPFRGDVVVV VGCGASGKDI
201: AMEVRGVAKE VHLVAKSMEE VTPGLAKVLA KHSANLHLQL HVERLCEDGL VVFGGGGSGV LADTIIYCTG YNYSFPFLHT AGAVTVDDNR VGPLFEHVFP
301: PSLAPSLSFV GIPIKVFAPR FFEAQAKWGA QVLSGRRTLP PEQEMMRSVE EYYRAREIAG VPKKYTHDVC LSETMPTVRT TNLADSLKRG IDYASYLKKE
401: HLSVTYILDR LIFIQRL
001: MAPARTRVNS LNVAVIGAGA AGLVAARELR RENHTVVVFE RDSKVGGLWV YTPNSEPDPL SLDPNRTIVH SSVYDSLRTN LPRECMGYRD FPFVPRPEDD
101: ESRDSRRYPS HREVLAYLED FAREFKLVEM VRFKTEVVLV EPEDKKWRVQ SKNSDGISKD EIFDAVVVCN GHYTEPRVAH VPGIDSWPGK QIHSHNYRVP
201: DQFKDQVVVV IGNFASGADI SRDITGVAKE VHIASRSNPS KTYSKLPGSN NLWLHSMIES VHEDGTIVFQ NGKVVQADTI VHCTGYKYHF PFLNTNGYIT
301: VEDNCVGPLY EHVFPPALAP GLSFIGLPWM TLQFFMFELQ SKWVAAALSG RVTLPSEEKM MEDVTAYYAK REAFGQPKRY THRLGGGQVD YLNWIAEQIG
401: APPGEQWRYQ EINGGYYRLA TQSDTFRDKW DDDHLIVEAY EDFLRQKLIS SLPSQLLES
101: ESRDSRRYPS HREVLAYLED FAREFKLVEM VRFKTEVVLV EPEDKKWRVQ SKNSDGISKD EIFDAVVVCN GHYTEPRVAH VPGIDSWPGK QIHSHNYRVP
201: DQFKDQVVVV IGNFASGADI SRDITGVAKE VHIASRSNPS KTYSKLPGSN NLWLHSMIES VHEDGTIVFQ NGKVVQADTI VHCTGYKYHF PFLNTNGYIT
301: VEDNCVGPLY EHVFPPALAP GLSFIGLPWM TLQFFMFELQ SKWVAAALSG RVTLPSEEKM MEDVTAYYAK REAFGQPKRY THRLGGGQVD YLNWIAEQIG
401: APPGEQWRYQ EINGGYYRLA TQSDTFRDKW DDDHLIVEAY EDFLRQKLIS SLPSQLLES
Arabidopsis Description
FMOGS-OX5Flavin-containing monooxygenase FMO GS-OX5 [Source:UniProtKB/Swiss-Prot;Acc:A8MRX0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.