Factsheet for TraesCS6B01G178800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G150700.1	Wheat	cytosol	76.08	88.49
TraesCS1B01G006000.1	Wheat	mitochondrion	66.19	79.46
TraesCS1B01G006200.1	Wheat	cytosol	72.37	78.7
TraesCS6B01G148900.1	Wheat	cytosol	78.56	74.41
TraesCS4B01G269700.1	Wheat	cytosol	70.72	69.29
TraesCS5B01G194300.1	Wheat	cytosol	64.54	65.89
TraesCS3B01G014100.2	Wheat	cytosol	70.1	65.64
TraesCS5B01G531000.1	Wheat	cytosol	59.38	58.18
TraesCS5B01G297400.1	Wheat	cytosol	54.64	57.36
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	53.61	57.14
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	53.61	57.14
TraesCS5B01G530900.1	Wheat	cytosol	59.59	55.79
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	52.16	55.73
Bra012970.1-P	Field mustard	cytosol	50.93	55.26
Bra012971.1-P	Field mustard	cytosol	52.37	55.22
CDY23072	Canola	cytosol	45.15	54.61
CDY02158	Canola	cytosol	45.15	54.61
CDY23071	Canola	cytosol	51.75	54.33
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	51.34	54.25
CDY02157	Canola	cytosol	51.55	54.11
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	50.52	54.08
CDY40773	Canola	mitochondrion	51.13	54.03
AT5G07800.1	Thale cress	cytosol	51.13	53.91
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	50.31	53.86
Bra028683.1-P	Field mustard	mitochondrion	50.93	53.81
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	50.72	53.36
AT5G61290.1	Thale cress	cytosol	50.52	53.15
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	11.75	50.0
TraesCS4B01G370500.1	Wheat	mitochondrion	40.41	44.14
TraesCS4B01G370200.1	Wheat	mitochondrion	41.44	43.41
TraesCS4B01G370400.1	Wheat	mitochondrion	41.65	42.8
TraesCS4B01G366800.1	Wheat	plastid	40.82	42.4
TraesCS1B01G224600.2	Wheat	cytosol	40.62	39.64
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	52.37	23.83

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PRINTS:PR00370
PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS6B01G178800	EnsemblPlants:TraesCS6B01G178800.1	SEG:seg

Description

No Description!

Coordinates

chr6B:+:198948714..198951429

Molecular Weight (calculated)

53750.1 Da

IEP (calculated)

6.467

GRAVY (calculated)

-0.233

Length

485 amino acids

Sequence
(BLAST)

001: MVCDESKALQ RKKVCVIGAG MAGLASAREL RREGHDVTVL EQNADVGGQW LYDPRGGGAD DPLGAAEPVK VHSSLYASLR VISARENMGF TDFHFAPKAG
101: RDGRRFPGHG EVQLYLKDFC DAFGLMEAVR LNTRVLRVAM AVAPTRQWMV RSVHEGTEEE EEEVFDAVVV ANGHYSQPRL PSIQGMEAWR GRQIHSHSYR
201: VPEPFRGDVV VVVGCGASGK DIAMEVRGVA KEVHLVAKSM EEVTPGLAKV LAKHSANLHL QLHVERLCED GRVVFGGGGS GVLADTIIYC TGYNYSFPFL
301: DTAGAVTVED NRVGPLFEHV FPPSLAPSLS FVGIPIKVFA PWFFEAQAKW VAQVLSGRRT LPPEQEMMRS VEEYYRAREI AGVPKKYIHD VCLSETMPTY
401: MDEFGSKYCD FPRVERWHHE LVVSLFANMN DNLETFRDDY HDSDSIRKGV EEWHLSAQQT QAAPAAKKMS LGLSRTSTVV CAHPS

Best Arabidopsis Sequence Match ( AT1G12200.1 )
(BLAST)

001: MATSHPDPTT SRHVAVIGAG AAGLVAAREL RREGHSVVVL ERGSQIGGVW AYTSQVEPDP LSLDPTRPVV HSSLYRSLRT NIPRECMGFT DFPFATRPHD
101: GSRDPRRHPA HTEVLAYLRD FAKEFDIEEM VRFETEVVKA EQVAAEGEER GKWRVESRSS DGVVDEIYDA VVVCNGHYTE PRHALITGID SWPGKQIHSH
201: NYRVPDQFKD QVVIVIGSSA SGVDICRDIA QVAKEVHVSS RSTSPDTYEK LTGYENLWLH STIQIAREDG SVVFENGKTI YADTIMHCTG YKYYFPFLDT
301: KGEVTVDDNR VGPLYKHVFP PALAPSLSFI GLPWQITPFP MFELQSKWVA AVLSGRVSLP SQDEMMEDTK AFYDKLEASG IPKRYTHLMP DDSQFEYDNW
401: LADQCEYPRI EKWREQMFYI GFKRIYAQSS TYRDNWDDDH LIVEAYDDFV KFMSSYQELL PMLKT

Arabidopsis Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178W1K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.