Factsheet for TraesCS4B01G269700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G269000.1	Wheat	cytosol	90.91	90.54
HORVU4Hr1G072260.1	Barley	cytosol	85.05	83.86
TraesCS3B01G014100.2	Wheat	cytosol	83.43	79.73
TraesCS1B01G006000.1	Wheat	mitochondrion	58.59	71.78
TraesCS6B01G178800.1	Wheat	cytosol	69.29	70.72
TraesCS1B01G006200.1	Wheat	cytosol	62.42	69.28
TraesCS6B01G148900.1	Wheat	cytosol	68.69	66.41
TraesCS5B01G194300.1	Wheat	cytosol	61.82	64.42
TraesCS5B01G531000.1	Wheat	cytosol	59.6	59.6
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	52.73	57.36
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	52.53	57.14
TraesCS5B01G297400.1	Wheat	cytosol	52.93	56.71
TraesCS5B01G530900.1	Wheat	cytosol	58.59	55.98
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	50.71	55.29
Bra012970.1-P	Field mustard	cytosol	49.9	55.26
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	50.71	54.68
Bra012971.1-P	Field mustard	cytosol	50.71	54.57
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	49.9	54.53
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	49.7	54.3
CDY40773	Canola	mitochondrion	50.3	54.25
CDY23071	Canola	cytosol	50.51	54.11
CDY02157	Canola	cytosol	50.51	54.11
Bra028683.1-P	Field mustard	mitochondrion	49.9	53.81
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	50.1	53.8
AT5G07800.1	Thale cress	cytosol	49.9	53.7
CDY02158	Canola	cytosol	43.43	53.62
CDY23072	Canola	cytosol	43.23	53.37
AT5G61290.1	Thale cress	cytosol	49.09	52.71
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	11.52	50.0
TraesCS4B01G370500.1	Wheat	mitochondrion	38.79	43.24
TraesCS4B01G370200.1	Wheat	mitochondrion	40.0	42.76
TraesCS4B01G370400.1	Wheat	mitochondrion	40.0	41.95
TraesCS4B01G366800.1	Wheat	plastid	39.19	41.54
TraesCS1B01G224600.2	Wheat	cytosol	38.18	38.03
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	51.11	23.73

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS4B01G269700	EnsemblPlants:TraesCS4B01G269700.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:544644667..544646432

Molecular Weight (calculated)

55026.3 Da

IEP (calculated)

6.456

GRAVY (calculated)

-0.315

Length

495 amino acids

Sequence
(BLAST)

001: MDTVCGSEPP QSKKVCVIGA GMAGLAAARE LRREAHDVTV LEQSGDVGGQ WLYDPRTDAA DPLGVAAPVK VHSSIYASLR LISPRQSTGF TDFPFCPKSG
101: RDDRRFPGHR EVHLYLKDFC NAFGLMEAVR LNTRVLHAAM TPARRWAVRS MDLGLVECDD TDEKTLDAYV DEVFDAVVVA TGHYSQPRLP SIEGMETWRG
201: RQMHSHSYRV PEPFRGEVVV VVGCGESGKD IAMEIRGVAK EVYLVAGSME AVTPGLSKVL AKHSANLHLR LEVERLCEDG RVAFKDGGGS SSSIAADTVI
301: YCTGYSYSFP FLETGGAVAV DDNRVGPLFE HVFPPSLAPS LSFVGVPRKI FAPRFFETQA RWVAQVLSGR RALPAEEEML RSVEEFYRAR EAAGVPRKYT
401: HEIGRRDITY MDDFGEKYCD FPRVEGWKHE LLVSSVRGMI ENLETFRDDY KDTGSIRRAM QEWHLSCVQW QSSPPSCCSY TDGRPCPTGL HQRAQ

Best Arabidopsis Sequence Match ( AT5G61290.1 )
(BLAST)

001: MVLVITEPIK SQSKTVCVIG AGPSGLVSAR ELKKEGHKVV VMEQNHDVGG QWLYQPNVDE EDTLGKTKTL KVHSSVYSSL RLASPREVMG FSDFPFIAKE
101: GRDSRRFPGH EELLLYLKDF CQVFGLREMI RFNVRVEFVG MVNEDDDDDD DVKKWMVKSV KKSGEVMEEV FDAVVVASGH YSYPRLPTIK GMDLWKRKQL
201: HSHIYRVPEP FCDEVVVVVG CSMSGQDISI ELVEVAKEVH LSTKSLDIPP GLSKVIEKHQ NLHLHPQIES LEEDGRVIFE DGSCIVADTI LYCTGYEYKF
301: PFLESKGRVE IDDNRVGPLF EHTFSPSLSP FLSFVGIPRK LIGFPFFESQ AKWIAKLLSG KTSLPSSDQM MQSISDFYLA READGIPKRN THDIADFNYS
401: DKYADYIGFP HLEEWRKVLC LSAILNSIEN LETYRDSWDD DDLLQETLQD PYFTQLSIPS V

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.