Factsheet for TraesCS1B01G224600.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G210600.1	Wheat	cytosol	70.42	96.42
TraesCS1D01G213900.2	Wheat	peroxisome	94.97	95.16
HORVU1Hr1G053900.1	Barley	cytosol, peroxisome	88.93	90.76
HORVU4Hr1G031220.3	Barley	mitochondrion, peroxisome	44.27	83.65
EER91959	Sorghum	mitochondrion	74.65	83.37
Zm00001d029865_P001	Maize	mitochondrion	73.44	82.95
OQU92170	Sorghum	cytosol	58.35	78.59
HORVU7Hr1G027520.8	Barley	endoplasmic reticulum, extracellular, golgi	48.49	77.0
Os10t0553800-01	Rice	peroxisome	74.65	76.97
GSMUA_Achr11P...	Banana	plastid	57.75	67.06
TraesCS4B01G370200.1	Wheat	mitochondrion	56.54	60.69
CDY31816	Canola	plastid	54.12	60.04
GSMUA_Achr2P18520_001	Banana	cytosol	45.88	60.0
KRH28040	Soybean	peroxisome, plastid	54.93	59.74
VIT_00s0233g00180.t01	Wine grape	cytosol	54.93	59.74
VIT_02s0154g00190.t01	Wine grape	cytosol	54.93	59.74
VIT_00s0233g00130.t01	Wine grape	plastid	25.35	59.72
Bra027033.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	43.66	59.62
CDY68139	Canola	mitochondrion	53.72	59.47
VIT_00s0233g00120.t01	Wine grape	cytosol, peroxisome, vacuole	14.69	59.35
TraesCS4B01G366800.1	Wheat	plastid	54.93	58.46
TraesCS4B01G370500.1	Wheat	mitochondrion	52.11	58.33
PGSC0003DMT400035866	Potato	cytosol, peroxisome, plastid	53.12	58.02
Bra036655.1-P	Field mustard	plastid	11.87	57.84
CDY31817	Canola	cytosol	30.18	57.69
TraesCS4B01G370400.1	Wheat	mitochondrion	54.73	57.63
AT1G62600.1	Thale cress	mitochondrion, plastid	52.11	57.3
VIT_02s0154g00170.t01	Wine grape	vacuole	51.71	56.98
CDY72131	Canola	cytosol	33.6	56.8
AT1G62620.1	Thale cress	cytosol	51.31	56.67
CDX98082	Canola	cytosol	33.6	56.61
CDY26543	Canola	plastid	52.72	56.47
Bra026986.1-P	Field mustard	plastid	52.72	56.47
AT1G63370.1	Thale cress	plastid	51.11	56.44
AT1G12200.1	Thale cress	cytosol	52.72	56.34
CDY15973	Canola	plastid	52.52	56.25
Bra027032.1-P	Field mustard	cytosol	47.69	56.16
CDY68140	Canola	plastid	47.69	56.16
Bra019747.1-P	Field mustard	cytosol	52.31	56.03
Solyc06g060610.2.1	Tomato	mitochondrion	53.52	55.77
CDY31244	Canola	plastid	50.1	55.58
Bra026988.1-P	Field mustard	plastid	50.91	55.12
PGSC0003DMT400043245	Potato	cytosol, peroxisome, plastid	50.5	55.04
CDY21037	Canola	plastid	49.5	54.91
CDY15969	Canola	plastid	50.7	54.9
AT1G12140.1	Thale cress	mitochondrion	50.5	54.68
CDY26541	Canola	plastid	50.3	54.47
VIT_02s0154g00180.t01	Wine grape	cytosol, peroxisome, vacuole	49.7	54.29
AT1G63340.1	Thale cress	plastid	45.88	53.77
CDY39802	Canola	plastid	13.48	52.76
CDY27695	Canola	plastid	25.55	52.7
VIT_02s0154g00160.t01	Wine grape	cytosol, peroxisome	46.28	52.51
Bra027035.1-P	Field mustard	plastid	48.29	52.06
Bra016787.1-P	Field mustard	plastid	49.7	52.0
CDY31813	Canola	plastid	48.09	51.84
CDY03270	Canola	cytosol	37.22	51.82
CDY12955	Canola	extracellular, plastid	48.09	51.62
AT1G62580.1	Thale cress	cytosol, plastid	51.51	51.51
AT1G62570.1	Thale cress	cytosol	47.28	50.98
AT1G65860.1	Thale cress	cytosol, extracellular, plastid	46.88	50.76
AT1G62560.1	Thale cress	plastid	46.68	50.22
VIT_18s0075g00690.t01	Wine grape	cytosol	10.26	50.0
VIT_00s0233g00170.t01	Wine grape	cytosol	25.15	50.0
CDX98777	Canola	cytosol, peroxisome, plasma membrane	27.57	49.1
AT1G62540.2	Thale cress	cytosol	47.48	48.96
AT1G12130.1	Thale cress	plastid	45.88	48.51
AT1G63390.1	Thale cress	mitochondrion	16.3	48.21
AT1G12160.1	Thale cress	cytosol, mitochondrion	44.87	47.65
TraesCS1B01G006000.1	Wheat	mitochondrion	36.22	44.55
TraesCS1B01G006200.1	Wheat	cytosol	37.42	41.7
TraesCS5B01G194300.1	Wheat	cytosol	39.03	40.84
TraesCS6B01G178800.1	Wheat	cytosol	39.64	40.62
TraesCS5B01G531000.1	Wheat	cytosol	38.83	38.99
TraesCS6B01G148900.1	Wheat	cytosol	40.04	38.87
TraesCS4B01G269700.1	Wheat	cytosol	38.03	38.18
TraesCS3B01G014100.2	Wheat	cytosol	38.23	36.68
TraesCS5B01G530900.1	Wheat	cytosol	37.63	36.1
TraesCS5B01G297400.1	Wheat	cytosol	32.6	35.06

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF199	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS1B01G224600	EnsemblPlants:TraesCS1B01G224600.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:403098504..403101292

Molecular Weight (calculated)

55557.6 Da

IEP (calculated)

6.038

GRAVY (calculated)

-0.358

Length

497 amino acids

Sequence
(BLAST)

001: MNETNRDGIA HGSWTQKKKT GEARRIQANS GSQLRNLFCS LLPSPMPSPS LRLAVVGAGA AGLAAARELR REGHAPVVFE RAAAVGGTWL YASPAPAAAT
101: DPLGAAATHS SLYASLRTNL PREVMGFLDF PFTAARGSVV DARRFPGHEE VLRYLEDFAQ RFDLYRLVRF QTEVVGVRRE AGGRWAVTSR KLGEKGEQDE
201: EVYDAVVVCN GHYSEPRVAS IPENLYFPTL TGADAWPGKQ MHSHNYRVPE PFLDQVVIVI GASASAVDIS RDIACVAKEV HIADRSTPTS TCEQQPEYDN
301: MWLHSMIDHA QGDGTVVFRD GSSIKADVIM HCTGYLYDFP FLGDDSTITV DDNCVDPLYK HVFPIEVAPE LSFIGLPWKV IPFPLFELQS KWVAGILSGR
401: IKLPSKDEMM EDVKAIYSRL ETRGWPKRYT HNFSGGYQFE YNDWLAEQCG HPPIEEWRKL MYAANAKNKA ARPERYRDEW DDDGLVALAN EDFKKYF

Best Arabidopsis Sequence Match ( AT1G62620.1 )
(BLAST)

001: MAPALSPTRS HHVAVIGAGP AGLVAARELR REGHSVVVFE KQKQVGGTWI YTDEVESDPL SVDPTRSVVH SSVYRSLRIN GTRECTGYRD FPFVVRSGVS
101: RDPRRFPSHG EVLAYLKDFA KEFGIEEMVR FETEVVKVSP AAEEGIGKWR IESTEKEKKV RRDEIYDAVV VCNGHYVEPR LAQIPGISSW PGKEMHSHNY
201: RIPEPFRDKV VVLIGNSSSA EDISRDIARV AKEVHVACRS NPADTFIKQT GYNNLWTHSM IESVHEDGSV VYQNGKTISV DIIMHCTGYK YHFPFLDTNG
301: IVTVDDNRVG PLYKDVFPPA FAPWLSFIGI PWQVLPFPMF ELQSKWIAGV LSGRIPLPSK EDMMIEIKTF YSTLEVQGIP KRYTHRMGNT QFEYYNWLAS
401: QCGCSETEEW RKEMCLANGV RKEAHPETYR DEWDDHHLVS EAYQDFSLYS

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.