Factsheet for VIT_02s0154g00180.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
plastid 1
mitochondrion 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0233g00170.t01	Wine grape	cytosol	49.45	90.0
VIT_00s0233g00130.t01	Wine grape	plastid	35.82	77.25
VIT_18s0075g00690.t01	Wine grape	cytosol	17.14	76.47
VIT_00s0233g00120.t01	Wine grape	cytosol, peroxisome, vacuole	20.44	75.61
VIT_02s0154g00170.t01	Wine grape	vacuole	72.75	73.39
VIT_02s0154g00190.t01	Wine grape	cytosol	72.75	72.43
VIT_00s0233g00180.t01	Wine grape	cytosol	71.43	71.12
VIT_02s0154g00160.t01	Wine grape	cytosol, peroxisome	63.52	65.98
PGSC0003DMT400035866	Potato	cytosol, peroxisome, plastid	59.56	59.56
KRH28040	Soybean	peroxisome, plastid	59.34	59.08
PGSC0003DMT400043245	Potato	cytosol, peroxisome, plastid	58.9	58.77
CDY31816	Canola	plastid	57.36	58.26
CDY68139	Canola	mitochondrion	57.14	57.91
Zm00001d029865_P001	Maize	mitochondrion	55.38	57.27
CDY31244	Canola	plastid	56.26	57.14
Solyc06g060610.2.1	Tomato	mitochondrion	59.78	57.02
CDY21037	Canola	plastid	56.04	56.92
AT1G62620.1	Thale cress	cytosol	56.26	56.89
AT1G62600.1	Thale cress	mitochondrion, plastid	56.48	56.86
AT1G63370.1	Thale cress	plastid	56.04	56.67
GSMUA_Achr11P...	Banana	plastid	52.97	56.31
AT1G12140.1	Thale cress	mitochondrion	56.26	55.77
Bra027033.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	44.62	55.77
CDY68140	Canola	plastid	51.65	55.69
CDY26541	Canola	plastid	56.04	55.56
EER91959	Sorghum	mitochondrion	54.29	55.51
Bra027032.1-P	Field mustard	cytosol	51.43	55.45
Bra026988.1-P	Field mustard	plastid	55.82	55.34
CDY15969	Canola	plastid	55.82	55.34
Bra036655.1-P	Field mustard	plastid	12.31	54.9
OQU92170	Sorghum	cytosol	44.4	54.74
TraesCS1A01G210600.1	Wheat	cytosol	43.52	54.55
CDY15973	Canola	plastid	55.38	54.31
CDY31817	Canola	cytosol	30.99	54.23
CDY26543	Canola	plastid	55.16	54.09
AT1G63340.1	Thale cress	plastid	50.33	54.01
Bra026986.1-P	Field mustard	plastid	54.95	53.88
TraesCS5A01G536600.1	Wheat	cytosol, peroxisome, plastid	39.12	53.78
Bra019747.1-P	Field mustard	cytosol	54.73	53.66
Bra027035.1-P	Field mustard	plastid	54.29	53.58
CDY31813	Canola	plastid	54.07	53.36
AT1G12200.1	Thale cress	cytosol	54.51	53.33
Bra016787.1-P	Field mustard	plastid	55.6	53.26
CDY12955	Canola	extracellular, plastid	54.07	53.13
TraesCS4D01G360800.1	Wheat	cytosol	36.92	52.83
CDY72131	Canola	cytosol	34.07	52.72
TraesCS4B01G370500.1	Wheat	mitochondrion	51.43	52.7
TraesCS4B01G370200.1	Wheat	mitochondrion	53.63	52.7
CDY27695	Canola	plastid	27.91	52.7
CDX98082	Canola	cytosol	34.07	52.54
AT1G62570.1	Thale cress	cytosol	53.19	52.49
TraesCS4D01G361000.1	Wheat	cytosol	53.19	52.49
AT1G12130.1	Thale cress	plastid	53.63	51.91
HORVU1Hr1G091130.12	Barley	cytosol, mitochondrion, peroxisome, plastid	53.41	51.59
AT1G62560.1	Thale cress	plastid	52.31	51.52
HORVU4Hr1G087900.7	Barley	cytosol, peroxisome	43.74	51.29
HORVU6Hr1G029800.7	Barley	mitochondrion	46.59	51.21
CDY39802	Canola	plastid	14.29	51.18
AT1G65860.1	Thale cress	cytosol, extracellular, plastid	51.43	50.98
AT1G12160.1	Thale cress	cytosol, mitochondrion	52.31	50.85
HORVU1Hr1G053900.1	Barley	cytosol, peroxisome	54.29	50.72
CDY03270	Canola	cytosol	39.78	50.7
AT1G63390.1	Thale cress	mitochondrion	18.68	50.6
TraesCS4B01G370400.1	Wheat	mitochondrion	52.31	50.42
TraesCS4B01G366800.1	Wheat	plastid	51.65	50.32
GSMUA_Achr2P18520_001	Banana	cytosol	41.98	50.26
Os10t0553800-01	Rice	peroxisome	53.19	50.21
HORVU4Hr1G031220.3	Barley	mitochondrion, peroxisome	29.01	50.19
Zm00001d027286_P001	Maize	cytosol	41.98	49.87
TraesCS1D01G213900.2	Wheat	peroxisome	54.29	49.8
TraesCS1B01G224600.2	Wheat	cytosol	54.29	49.7
VIT_13s0019g00660.t01	Wine grape	mitochondrion	50.11	49.67
TraesCS4D01G360900.1	Wheat	cytosol	52.53	49.48
TraesCS5A01G536300.1	Wheat	cytosol	9.67	49.44
TraesCS6A01G150100.1	Wheat	mitochondrion	19.78	49.18
AT1G62540.2	Thale cress	cytosol	52.09	49.17
TraesCS6D01G139800.1	Wheat	mitochondrion	48.57	49.11
AT1G62580.1	Thale cress	cytosol, plastid	53.63	49.09
KXG40414	Sorghum	cytosol	41.54	49.09
VIT_13s0019g00620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.01	48.9
TraesCS5A01G534500.1	Wheat	cytosol	50.55	48.83
CDX98777	Canola	cytosol, peroxisome, plasma membrane	29.89	48.75
HORVU6Hr1G061340.1	Barley	mitochondrion	20.22	47.42
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	46.37	46.48
HORVU7Hr1G027520.8	Barley	endoplasmic reticulum, extracellular, golgi	31.43	45.69
VIT_00s0131g00120.t01	Wine grape	cytosol	25.71	44.83
TraesCS5A01G536500.2	Wheat	cytosol, endoplasmic reticulum, plastid	52.31	44.65
Zm00001d046637_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	11.87	44.63
HORVU6Hr1G094480.7	Barley	plastid	34.73	44.01
HORVU2Hr1G026400.29	Barley	cytosol	13.19	43.8
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	48.35	20.64

Protein Annotations

EntrezGene:100852623	wikigene:100852623	Gene3D:3.50.50.60	MapMan:35.1	ProteinID:CBI31894	ProteinID:CBI31894.3
UniProt:D7TN21	InterPro:FAD/NAD-bd_sf	EMBL:FN596001	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188
EntrezGene:LOC100852623	wikigene:LOC100852623	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00370	PANTHER:PTHR23023
PANTHER:PTHR23023:SF195	SUPFAM:SSF51905	UniParc:UPI0001BE3AC0	ArrayExpress:VIT_02s0154g00180	EnsemblPlantsGene:VIT_02s0154g00180	EnsemblPlants:VIT_02s0154g00180.t01
RefSeq:XP_003631451	RefSeq:XP_003631451.1	:	:	:	:

Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:D7TN21]

Coordinates

chr2:-:4962612..4965728

Molecular Weight (calculated)

50704.6 Da

IEP (calculated)

6.087

GRAVY (calculated)

-0.124

Length

455 amino acids

Sequence
(BLAST)

001: MSLTISELKV RNVAVIGAGP CGLSAAKELR REGHKVVVFE RQGQAGGTWV YNPTVEADPL GSDPSRTIVH SSVYASLRTN LPRELMGFRD YPFVSTGQPY
101: SESRRFPGHR EVFLYINDYA TAFGLTELVR FETEVVYAGL VNGKWRVRSR MANGVTVDEI FDAVVVCNGH DTEPRTAEIP GIDAWPGKQM HSHNYRIPDP
201: FRDLVVILIG VGSSALDISM DIAQVAKEVH IASRSAKVGV LGNVSGYDNL KLHPMIESVH KDGSVIFNDG SVVLADVILH CTGYKYHLPF LDTNGIVTVE
301: DNCVGPLYKH TFPPALAPWL SFVGLPLMGI GFILYEFQSN WIAGVLSGRI GLPSEEEMMR DVEALYLLLE ASGTPKRYTH GIGHCRIEYM DWFAGECGIP
401: GVEEWRKEMY YATKKNYLVR PHAFRDDWED EELALKAHED FVKCRSNGVD RTCIS

Best Arabidopsis Sequence Match ( AT1G62620.1 )
(BLAST)

001: MAPALSPTRS HHVAVIGAGP AGLVAARELR REGHSVVVFE KQKQVGGTWI YTDEVESDPL SVDPTRSVVH SSVYRSLRIN GTRECTGYRD FPFVVRSGVS
101: RDPRRFPSHG EVLAYLKDFA KEFGIEEMVR FETEVVKVSP AAEEGIGKWR IESTEKEKKV RRDEIYDAVV VCNGHYVEPR LAQIPGISSW PGKEMHSHNY
201: RIPEPFRDKV VVLIGNSSSA EDISRDIARV AKEVHVACRS NPADTFIKQT GYNNLWTHSM IESVHEDGSV VYQNGKTISV DIIMHCTGYK YHFPFLDTNG
301: IVTVDDNRVG PLYKDVFPPA FAPWLSFIGI PWQVLPFPMF ELQSKWIAGV LSGRIPLPSK EDMMIEIKTF YSTLEVQGIP KRYTHRMGNT QFEYYNWLAS
401: QCGCSETEEW RKEMCLANGV RKEAHPETYR DEWDDHHLVS EAYQDFSLYS

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.