Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G12160.1 | Thale cress | cytosol, mitochondrion | 74.04 | 74.36 |
| AT1G63390.1 | Thale cress | mitochondrion | 23.19 | 64.88 |
| AT1G12140.1 | Thale cress | mitochondrion | 63.19 | 64.71 |
| VIT_00s0233g00120.t01 | Wine grape | cytosol, peroxisome, vacuole | 16.38 | 62.6 |
| AT1G12200.1 | Thale cress | cytosol | 61.28 | 61.94 |
| AT1G65860.1 | Thale cress | cytosol, extracellular, plastid | 60.43 | 61.87 |
| AT1G62570.1 | Thale cress | cytosol | 60.43 | 61.61 |
| AT1G62560.1 | Thale cress | plastid | 60.21 | 61.26 |
| AT1G63340.1 | Thale cress | plastid | 54.47 | 60.38 |
| AT1G62600.1 | Thale cress | mitochondrion, plastid | 57.45 | 59.73 |
| AT1G62540.2 | Thale cress | cytosol | 60.85 | 59.34 |
| AT1G62620.1 | Thale cress | cytosol | 55.96 | 58.44 |
| AT1G63370.1 | Thale cress | plastid | 55.53 | 58.0 |
| VIT_00s0233g00130.t01 | Wine grape | plastid | 25.96 | 57.82 |
| AT1G62580.1 | Thale cress | cytosol, plastid | 58.94 | 55.73 |
| VIT_02s0154g00190.t01 | Wine grape | cytosol | 53.83 | 55.36 |
| TraesCS5A01G536600.1 | Wheat | cytosol, peroxisome, plastid | 38.72 | 54.98 |
| VIT_00s0233g00180.t01 | Wine grape | cytosol | 53.19 | 54.7 |
| PGSC0003DMT400035866 | Potato | cytosol, peroxisome, plastid | 52.55 | 54.29 |
| EER91959 | Sorghum | mitochondrion | 51.28 | 54.16 |
| Zm00001d029865_P001 | Maize | mitochondrion | 50.64 | 54.09 |
| KRH28040 | Soybean | peroxisome, plastid | 52.34 | 53.83 |
| TraesCS4D01G360800.1 | Wheat | cytosol | 36.38 | 53.77 |
| VIT_02s0154g00180.t01 | Wine grape | cytosol, peroxisome, vacuole | 51.91 | 53.63 |
| GSMUA_Achr11P... | Banana | plastid | 48.72 | 53.5 |
| TraesCS4B01G370500.1 | Wheat | mitochondrion | 50.21 | 53.15 |
| PGSC0003DMT400043245 | Potato | cytosol, peroxisome, plastid | 51.28 | 52.85 |
| HORVU4Hr1G087900.7 | Barley | cytosol, peroxisome | 43.4 | 52.58 |
| VIT_02s0154g00160.t01 | Wine grape | cytosol, peroxisome | 48.94 | 52.51 |
| TraesCS4D01G361000.1 | Wheat | cytosol | 51.49 | 52.49 |
| Solyc06g060610.2.1 | Tomato | mitochondrion | 53.19 | 52.41 |
| TraesCS4B01G370200.1 | Wheat | mitochondrion | 51.49 | 52.27 |
| VIT_02s0154g00170.t01 | Wine grape | vacuole | 50.0 | 52.11 |
| HORVU1Hr1G091130.12 | Barley | cytosol, mitochondrion, peroxisome, plastid | 51.91 | 51.8 |
| TraesCS4B01G366800.1 | Wheat | plastid | 51.28 | 51.61 |
| OQU92170 | Sorghum | cytosol | 40.0 | 50.95 |
| TraesCS5A01G534500.1 | Wheat | cytosol | 50.64 | 50.53 |
| TraesCS1A01G210600.1 | Wheat | cytosol | 38.72 | 50.14 |
| TraesCS6D01G139800.1 | Wheat | mitochondrion | 47.87 | 50.0 |
| TraesCS4B01G370400.1 | Wheat | mitochondrion | 50.0 | 49.79 |
| HORVU6Hr1G029800.7 | Barley | mitochondrion | 43.62 | 49.52 |
| TraesCS4D01G360900.1 | Wheat | cytosol | 50.85 | 49.48 |
| TraesCS6A01G150100.1 | Wheat | mitochondrion | 19.15 | 49.18 |
| HORVU6Hr1G061340.1 | Barley | mitochondrion | 20.21 | 48.97 |
| Os10t0553800-01 | Rice | peroxisome | 49.79 | 48.55 |
| HORVU1Hr1G053900.1 | Barley | cytosol, peroxisome | 48.94 | 47.23 |
| VIT_00s0233g00170.t01 | Wine grape | cytosol | 25.11 | 47.2 |
| HORVU4Hr1G031220.3 | Barley | mitochondrion, peroxisome | 26.38 | 47.15 |
| Zm00001d027286_P001 | Maize | cytosol | 38.09 | 46.74 |
| KXG40414 | Sorghum | cytosol | 38.09 | 46.49 |
| TraesCS1B01G224600.2 | Wheat | cytosol | 48.51 | 45.88 |
| TraesCS1D01G213900.2 | Wheat | peroxisome | 48.09 | 45.56 |
| GSMUA_Achr2P18520_001 | Banana | cytosol | 36.6 | 45.26 |
| HORVU2Hr1G026400.29 | Barley | cytosol | 13.19 | 45.26 |
| HORVU6Hr1G094480.7 | Barley | plastid | 34.04 | 44.57 |
| TraesCS5A01G536500.2 | Wheat | cytosol, endoplasmic reticulum, plastid | 49.79 | 43.9 |
| AT5G07800.1 | Thale cress | cytosol | 42.77 | 43.7 |
| HORVU7Hr1G027520.8 | Barley | endoplasmic reticulum, extracellular, golgi | 28.72 | 43.13 |
| AT5G61290.1 | Thale cress | cytosol | 42.13 | 42.95 |
| VIT_18s0075g00690.t01 | Wine grape | cytosol | 9.15 | 42.16 |
| TraesCS5A01G536300.1 | Wheat | cytosol | 7.87 | 41.57 |
| Zm00001d046637_P001 | Maize | cytosol, mitochondrion, peroxisome, plastid | 10.64 | 41.32 |
Protein Annotations
| Gene3D:3.50.50.60 | MapMan:35.1 | EntrezGene:837765 | ProteinID:AAG12580.1 | ProteinID:AEE28840.1 | ArrayExpress:AT1G12130 |
| EnsemblPlantsGene:AT1G12130 | RefSeq:AT1G12130 | TAIR:AT1G12130 | RefSeq:AT1G12130-TAIR-G | EnsemblPlants:AT1G12130.1 | TAIR:AT1G12130.1 |
| Unigene:At.51584 | EMBL:BT026366 | EMBL:DQ056453 | InterPro:FAD/NAD-bd_sf | InterPro:Flavin_mOase | InterPro:Flavin_mOase-like |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0004499 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009751 |
| GO:GO:0009753 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0019748 | GO:GO:0019761 | GO:GO:0050660 |
| GO:GO:0050661 | GO:GO:0055114 | InterPro:IPR036188 | RefSeq:NP_172677.1 | PFAM:PF00743 | PRINTS:PR00370 |
| PANTHER:PTHR23023 | PANTHER:PTHR23023:SF198 | UniProt:Q9FWW3 | SUPFAM:SSF51905 | UniParc:UPI00000A8431 | SEG:seg |
Description
Flavin-containing monooxygenase FMO GS-OX-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWW3]
Coordinates
chr1:+:4118594..4120959
Molecular Weight (calculated)
53839.7 Da
IEP (calculated)
5.903
GRAVY (calculated)
-0.378
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPPPNSISS RNVAVIGAGA AGLVAARELR REGHTVTIFE RQKQVGGLWV CTPNVEPDLL SIDPDRTVVH SSVYQSLRTN LPRECMGYSD FPFVTRPDDE
101: SRDPRRYPDH REVMRYLQDF AKEFKIEEMI RFETEVFRVE PTAENSCKWR VQFRSSSGVS GEDIFDAVVI CNGHFTEPRL AHIPGIESWP GKQIHSHNYR
201: VSDPFKGQVV IVIGYQSSGS DISRDIAILA KEVHIAAKSD AYAKESSIYS NLHFHPTIDR VYEDGSVVFQ DGKLIFADAI VHCTGYKYCF PFLETKGYVN
301: VEDNRVGPLY KHVFPPALAP GLSFIGLPSM ALQFFMFEIQ SRWVASVLSG RVKLPSEEQM MEDVIAFYAK LKSLGIPKRF THFLTDPQWT PMFEKLKPHE
401: AVLISQSEYF NWIAEQCGCS SIERWREEQY NIAIKKDDDN FRDEWDDDDQ IIQEAYRDFA KFKPSKVWST
101: SRDPRRYPDH REVMRYLQDF AKEFKIEEMI RFETEVFRVE PTAENSCKWR VQFRSSSGVS GEDIFDAVVI CNGHFTEPRL AHIPGIESWP GKQIHSHNYR
201: VSDPFKGQVV IVIGYQSSGS DISRDIAILA KEVHIAAKSD AYAKESSIYS NLHFHPTIDR VYEDGSVVFQ DGKLIFADAI VHCTGYKYCF PFLETKGYVN
301: VEDNRVGPLY KHVFPPALAP GLSFIGLPSM ALQFFMFEIQ SRWVASVLSG RVKLPSEEQM MEDVIAFYAK LKSLGIPKRF THFLTDPQWT PMFEKLKPHE
401: AVLISQSEYF NWIAEQCGCS SIERWREEQY NIAIKKDDDN FRDEWDDDDQ IIQEAYRDFA KFKPSKVWST
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.