Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31813 | Canola | plastid | 78.87 | 78.52 |
| Bra027035.1-P | Field mustard | plastid | 78.65 | 78.31 |
| CDY12955 | Canola | extracellular, plastid | 78.43 | 77.75 |
| AT1G62540.2 | Thale cress | cytosol | 80.83 | 76.97 |
| AT1G62560.1 | Thale cress | plastid | 77.12 | 76.62 |
| AT1G62570.1 | Thale cress | cytosol | 74.29 | 73.97 |
| AT1G12140.1 | Thale cress | mitochondrion | 68.41 | 68.41 |
| AT1G63390.1 | Thale cress | mitochondrion | 22.88 | 62.5 |
| AT1G12200.1 | Thale cress | cytosol | 62.31 | 61.51 |
| AT1G12130.1 | Thale cress | plastid | 61.87 | 60.43 |
| AT1G12160.1 | Thale cress | cytosol, mitochondrion | 61.0 | 59.83 |
| AT1G63340.1 | Thale cress | plastid | 54.9 | 59.43 |
| AT1G62600.1 | Thale cress | mitochondrion, plastid | 58.17 | 59.07 |
| AT1G62620.1 | Thale cress | cytosol | 57.52 | 58.67 |
| AT1G63370.1 | Thale cress | plastid | 57.3 | 58.44 |
| VIT_00s0233g00130.t01 | Wine grape | plastid | 25.93 | 56.4 |
| AT1G62580.1 | Thale cress | cytosol, plastid | 59.7 | 55.13 |
| VIT_00s0233g00120.t01 | Wine grape | cytosol, peroxisome, vacuole | 14.6 | 54.47 |
| EER91959 | Sorghum | mitochondrion | 52.29 | 53.93 |
| Zm00001d029865_P001 | Maize | mitochondrion | 51.63 | 53.86 |
| KRH28040 | Soybean | peroxisome, plastid | 53.59 | 53.83 |
| VIT_02s0154g00190.t01 | Wine grape | cytosol | 53.38 | 53.61 |
| PGSC0003DMT400035866 | Potato | cytosol, peroxisome, plastid | 52.94 | 53.41 |
| PGSC0003DMT400043245 | Potato | cytosol, peroxisome, plastid | 52.94 | 53.29 |
| VIT_02s0154g00170.t01 | Wine grape | vacuole | 52.07 | 52.99 |
| GSMUA_Achr11P... | Banana | plastid | 49.24 | 52.8 |
| VIT_00s0233g00180.t01 | Wine grape | cytosol | 52.51 | 52.74 |
| VIT_02s0154g00180.t01 | Wine grape | cytosol, peroxisome, vacuole | 50.98 | 51.43 |
| TraesCS1A01G210600.1 | Wheat | cytosol | 40.52 | 51.24 |
| Solyc06g060610.2.1 | Tomato | mitochondrion | 52.94 | 50.94 |
| TraesCS6A01G150100.1 | Wheat | mitochondrion | 20.26 | 50.82 |
| TraesCS4D01G361000.1 | Wheat | cytosol | 50.98 | 50.76 |
| TraesCS4B01G370200.1 | Wheat | mitochondrion | 51.2 | 50.76 |
| TraesCS5A01G536600.1 | Wheat | cytosol, peroxisome, plastid | 36.6 | 50.76 |
| TraesCS6D01G139800.1 | Wheat | mitochondrion | 49.67 | 50.67 |
| HORVU1Hr1G091130.12 | Barley | cytosol, mitochondrion, peroxisome, plastid | 51.85 | 50.53 |
| HORVU4Hr1G087900.7 | Barley | cytosol, peroxisome | 42.7 | 50.52 |
| VIT_02s0154g00160.t01 | Wine grape | cytosol, peroxisome | 48.15 | 50.46 |
| TraesCS4D01G360800.1 | Wheat | cytosol | 34.86 | 50.31 |
| OQU92170 | Sorghum | cytosol | 40.3 | 50.14 |
| TraesCS4B01G366800.1 | Wheat | plastid | 50.98 | 50.11 |
| HORVU6Hr1G061340.1 | Barley | mitochondrion | 20.91 | 49.48 |
| TraesCS4B01G370500.1 | Wheat | mitochondrion | 47.71 | 49.32 |
| HORVU6Hr1G029800.7 | Barley | mitochondrion | 44.44 | 49.28 |
| TraesCS5A01G534500.1 | Wheat | cytosol | 50.33 | 49.04 |
| TraesCS4B01G370400.1 | Wheat | mitochondrion | 50.33 | 48.94 |
| Os10t0553800-01 | Rice | peroxisome | 50.76 | 48.34 |
| HORVU1Hr1G053900.1 | Barley | cytosol, peroxisome | 50.54 | 47.64 |
| TraesCS4D01G360900.1 | Wheat | cytosol | 50.11 | 47.62 |
| Zm00001d027286_P001 | Maize | cytosol | 39.65 | 47.52 |
| TraesCS1B01G224600.2 | Wheat | cytosol | 50.76 | 46.88 |
| KXG40414 | Sorghum | cytosol | 39.22 | 46.75 |
| TraesCS1D01G213900.2 | Wheat | peroxisome | 50.11 | 46.37 |
| HORVU4Hr1G031220.3 | Barley | mitochondrion, peroxisome | 26.36 | 46.01 |
| GSMUA_Achr2P18520_001 | Banana | cytosol | 37.47 | 45.26 |
| VIT_00s0233g00170.t01 | Wine grape | cytosol | 24.4 | 44.8 |
| HORVU2Hr1G026400.29 | Barley | cytosol | 13.29 | 44.53 |
| AT5G07800.1 | Thale cress | cytosol | 43.57 | 43.48 |
| TraesCS5A01G536500.2 | Wheat | cytosol, endoplasmic reticulum, plastid | 50.33 | 43.34 |
| VIT_18s0075g00690.t01 | Wine grape | cytosol | 9.59 | 43.14 |
| AT5G61290.1 | Thale cress | cytosol | 43.14 | 42.95 |
| HORVU7Hr1G027520.8 | Barley | endoplasmic reticulum, extracellular, golgi | 28.32 | 41.53 |
| HORVU6Hr1G094480.7 | Barley | plastid | 31.81 | 40.67 |
| Zm00001d046637_P001 | Maize | cytosol, mitochondrion, peroxisome, plastid | 10.46 | 39.67 |
| TraesCS5A01G536300.1 | Wheat | cytosol | 7.41 | 38.2 |
Protein Annotations
| Gene3D:3.50.50.60 | EntrezGene:842897 | MapMan:9.5.1.10.1 | ProteinID:AAF06046.1 | ProteinID:AEE34434.1 | ArrayExpress:AT1G65860 |
| EnsemblPlantsGene:AT1G65860 | RefSeq:AT1G65860 | TAIR:AT1G65860 | RefSeq:AT1G65860-TAIR-G | EnsemblPlants:AT1G65860.1 | TAIR:AT1G65860.1 |
| Unigene:At.35830 | EMBL:BT000473 | EMBL:BT002190 | InterPro:FAD/NAD-bd_sf | Symbol:FMO GS-OX1 | InterPro:Flavin_mOase |
| InterPro:Flavin_mOase-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0004499 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016491 |
| GO:GO:0019748 | GO:GO:0033506 | GO:GO:0050660 | GO:GO:0050661 | GO:GO:0055114 | GO:GO:0080102 |
| GO:GO:0080103 | GO:GO:0080104 | GO:GO:0080105 | GO:GO:0080106 | GO:GO:0080107 | InterPro:IPR036188 |
| RefSeq:NP_176761.1 | PFAM:PF00743 | PIRSF:PIRSF000332 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0009006 |
| PO:PO:0009025 | PO:PO:0009046 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PRINTS:PR00370 | PANTHER:PTHR23023 | PANTHER:PTHR23023:SF198 | UniProt:Q9SS04 | SUPFAM:SSF51905 | UniParc:UPI00000AC5E5 |
| SEG:seg | : | : | : | : | : |
Description
FMOGS-OX1Flavin-containing monooxygenase FMO GS-OX1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS04]
Coordinates
chr1:-:24498954..24502776
Molecular Weight (calculated)
52312.2 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.275
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTQNTICS KHVAVIGAGA AGLVTARELR REGHTVVVFD REKQVGGLWN YSSKADSDPL SLDTTRTIVH TSIYESLRTN LPRECMGFTD FPFVPRIHDI
101: SRDSRRYPSH REVLAYLQDF AREFKIEEMV RFETEVVCVE PVNGKWSVRS KNSVGFAAHE IFDAVVVCSG HFTEPNVAHI PGIKSWPGKQ IHSHNYRVPG
201: PFNNEVVVVI GNYASGADIS RDIAKVAKEV HIASRASESD TYQKLPVPQN NLWVHSEIDF AHQDGSILFK NGKVVYADTI VHCTGYKYYF PFLETNGYIN
301: INENRVEPLY KHVFLPALAP SLSFIGLPGM AIQFVMFEIQ SKWVAAVLSG RVILPSQDKM MEDIIEWYAT LDVLGIPKRH THKLGKISCE YLNWIAEECH
401: CSPVENWRIQ EVERGFQRMV SHPEIYRDEW DDDDLMEEAY KDFARKKLIS SHPSYFLES
101: SRDSRRYPSH REVLAYLQDF AREFKIEEMV RFETEVVCVE PVNGKWSVRS KNSVGFAAHE IFDAVVVCSG HFTEPNVAHI PGIKSWPGKQ IHSHNYRVPG
201: PFNNEVVVVI GNYASGADIS RDIAKVAKEV HIASRASESD TYQKLPVPQN NLWVHSEIDF AHQDGSILFK NGKVVYADTI VHCTGYKYYF PFLETNGYIN
301: INENRVEPLY KHVFLPALAP SLSFIGLPGM AIQFVMFEIQ SKWVAAVLSG RVILPSQDKM MEDIIEWYAT LDVLGIPKRH THKLGKISCE YLNWIAEECH
401: CSPVENWRIQ EVERGFQRMV SHPEIYRDEW DDDDLMEEAY KDFARKKLIS SHPSYFLES
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.