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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027286_P001 Maize cytosol 87.79 88.25
OQU92170 Sorghum cytosol 61.04 63.69
TraesCS4D01G360800.1 Wheat cytosol 50.65 61.32
VIT_00s0233g00120.t01 Wine grape cytosol, peroxisome, vacuole 18.96 59.35
TraesCS5A01G536600.1 Wheat cytosol, peroxisome, plastid 49.61 57.7
Bra027033.1-P Field mustard cytoskeleton, cytosol, peroxisome 53.51 56.59
HORVU4Hr1G087900.7 Barley cytosol, peroxisome 56.88 56.44
CDY31817 Canola cytosol 37.4 55.38
TraesCS5A01G536300.1 Wheat cytosol 12.47 53.93
GSMUA_Achr2P18520_001 Banana cytosol 52.21 52.89
CDY72131 Canola cytosol 40.26 52.72
GSMUA_Achr11P... Banana plastid 58.44 52.57
CDX98082 Canola cytosol 40.26 52.54
EER91959 Sorghum mitochondrion 59.48 51.46
TraesCS4B01G370500.1 Wheat mitochondrion 57.14 49.55
HORVU6Hr1G094480.7 Barley plastid 45.45 48.75
CDY03270 Canola cytosol 45.19 48.74
TraesCS4B01G366800.1 Wheat plastid 58.44 48.18
HORVU1Hr1G091130.12 Barley cytosol, mitochondrion, peroxisome, plastid 58.7 47.98
TraesCS4D01G361000.1 Wheat cytosol 57.4 47.94
TraesCS6D01G139800.1 Wheat mitochondrion 55.58 47.56
TraesCS4B01G370400.1 Wheat mitochondrion 57.14 46.61
TraesCS4B01G370200.1 Wheat mitochondrion 55.84 46.44
HORVU6Hr1G029800.7 Barley mitochondrion 49.87 46.38
CDY31816 Canola plastid 53.77 46.21
TraesCS5A01G534500.1 Wheat cytosol 56.36 46.07
TraesCS4D01G360900.1 Wheat cytosol 57.66 45.96
CDY68139 Canola mitochondrion 53.51 45.88
CDX98777 Canola cytosol, peroxisome, plasma membrane 32.99 45.52
AT1G62600.1 Thale cress mitochondrion, plastid 53.25 45.35
VIT_00s0233g00170.t01 Wine grape cytosol 29.35 45.2
VIT_18s0075g00690.t01 Wine grape cytosol 11.95 45.1
AT1G62620.1 Thale cress cytosol 51.69 44.22
AT1G63370.1 Thale cress plastid 51.69 44.22
VIT_02s0154g00190.t01 Wine grape cytosol 52.47 44.2
VIT_00s0233g00180.t01 Wine grape cytosol 51.69 43.54
PGSC0003DMT400035866 Potato cytosol, peroxisome, plastid 51.17 43.3
CDY26543 Canola plastid 51.69 42.89
Bra019747.1-P Field mustard cytosol 51.69 42.89
Bra026986.1-P Field mustard plastid 51.69 42.89
CDY15973 Canola plastid 51.43 42.67
KRH28040 Soybean peroxisome, plastid 50.65 42.67
Bra027032.1-P Field mustard cytosol 46.49 42.42
AT1G12200.1 Thale cress cytosol 51.17 42.37
CDY68140 Canola plastid 46.23 42.18
VIT_02s0154g00170.t01 Wine grape vacuole 49.35 42.13
AT1G12140.1 Thale cress mitochondrion 49.87 41.83
VIT_02s0154g00180.t01 Wine grape cytosol, peroxisome, vacuole 49.09 41.54
CDY31244 Canola plastid 48.31 41.52
Solyc06g060610.2.1 Tomato mitochondrion 51.43 41.51
TraesCS5A01G536500.2 Wheat cytosol, endoplasmic reticulum, plastid 57.4 41.46
PGSC0003DMT400043245 Potato cytosol, peroxisome, plastid 48.83 41.23
CDY21037 Canola plastid 47.79 41.07
CDY12955 Canola extracellular, plastid 49.35 41.04
Bra027035.1-P Field mustard plastid 49.09 41.0
CDY31813 Canola plastid 48.57 40.56
Bra026988.1-P Field mustard plastid 48.31 40.52
CDY15969 Canola plastid 48.05 40.3
AT1G63340.1 Thale cress plastid 44.16 40.09
CDY26541 Canola plastid 47.79 40.09
AT1G65860.1 Thale cress cytosol, extracellular, plastid 46.75 39.22
VIT_02s0154g00160.t01 Wine grape cytosol, peroxisome 44.42 39.04
Bra016787.1-P Field mustard plastid 48.05 38.95
AT1G62580.1 Thale cress cytosol, plastid 50.13 38.83
AT1G62570.1 Thale cress cytosol 46.49 38.83
AT1G62560.1 Thale cress plastid 46.49 38.74
AT1G12130.1 Thale cress plastid 46.49 38.09
KXG38941 Sorghum mitochondrion 42.86 37.93
AT1G12160.1 Thale cress cytosol, mitochondrion 45.97 37.82
AT1G62540.2 Thale cress cytosol 47.01 37.55
KXG38945 Sorghum mitochondrion 41.56 36.78
EER94515 Sorghum cytosol 41.04 36.24
OQU92163 Sorghum mitochondrion 41.04 36.16
Bra036655.1-P Field mustard plastid 9.35 35.29
EER97845 Sorghum cytosol 38.44 35.07
TraesCS6A01G150100.1 Wheat mitochondrion 16.36 34.43
VIT_00s0233g00130.t01 Wine grape plastid 18.44 33.65
CDY27695 Canola plastid 21.04 33.61
OQU88310 Sorghum cytosol, mitochondrion 36.88 33.41
CDY39802 Canola plastid 10.91 33.07
EER95747 Sorghum cytosol 38.18 31.08
AT1G63390.1 Thale cress mitochondrion 8.05 18.45
Protein Annotations
Gene3D:3.50.50.60MapMan:35.1UniProt:A0A1B6QR65InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOaseInterPro:Flavin_mOase-like
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0004499GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0050660GO:GO:0050661GO:GO:0055114
InterPro:IPR036188EnsemblPlants:KXG40414ProteinID:KXG40414ProteinID:KXG40414.1PFAM:PF00743PRINTS:PR00370
PANTHER:PTHR23023PANTHER:PTHR23023:SF199EnsemblPlantsGene:SORBI_3001G541700SUPFAM:SSF51971UniParc:UPI00081ADE55SEG:seg
Description
hypothetical protein
Coordinates
chr1:-:80481615..80482772
Molecular Weight (calculated)
43839.6 Da
IEP (calculated)
5.302
GRAVY (calculated)
-0.414
Length
385 amino acids
Sequence
(BLAST)
001: MGFLDFPFAA ASDSVDARRF PRHQEVLRYI QAFARRFHLD GLVRLRTEVL AVTTKDDDEG SSWRVRWRRN AAAAGEQEEE EEEVFDAVVV CNGHYTEPRT
101: AADDIPGLDA WPPGKQMHSH SYRVPGPFAD QVVVIVGASN SGADISREIA GVAREVHMAD RWAPAATCRR LPGYRNLWLR SMVERADADG TTVVFRDGSS
201: VRADVVMHCT GYKYSFPFLL TAAGDGDTAV VSVDDNRIHP LYKHVFVPQL APHLAFIGLP FKVIPFPMFQ LQASWVAGAL SGRIQLPSEE EMMEDVRALY
301: SELEVMGWPV RYTHCMKHSQ FEYDEWLAEQ CQCGGEAGTR TVEEWRKDMF NATRKKKLQC PETYRDEWDD HHLLEQAYQD FNNYL
Best Arabidopsis Sequence Match ( AT1G62600.1 )
(BLAST)
001: MAPSLSPIRS HHVAVIGAGA AGLVAARELR REGHSVVVFE RQKQVGGTWI YTDHIEPDPL SVDPTRSVVH SSVYGSLRTN LPRECMGYRD FPFVIRSDVS
101: ESRDPRRFPS HGEVLAYLQD FAKEFAIEEM IRFDTAVVKV APAAEEGSGK WRIESTEKEK KVLRDEIYDA VVVCNGHYIE PRHAEIPGIS SWPGKEMHSH
201: NYRIPEPFRD QVVVLIGNSA SADDISRDIA RVAKEVHVAC RSNAADTYIE RPGYSNLWMH SMIESVHEDG SVVFQNGKTI SVDVIMHCTG YKYHFPFLET
301: NGNVTVDDNR VGPLYKDVFS PAFAPWLSFV GIPWKVVPFP MFELQSKWIA GVLSGRIPLP SKEDMMMEIK TLYSTLDAQG IAKRYTHQMG ISQFEYNSWL
401: ASQCGCSETE EWRKEMYFAT GVKKRAHPET YRDEWDDHHL VSQAYQDFSL YT
Arabidopsis Description
Flavin-containing monooxygenase FMO GS-OX-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94BV5]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.