CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92163	Sorghum	mitochondrion	94.27	94.05
KXG38945	Sorghum	mitochondrion	91.74	91.95
Zm00001d029924_P001	Maize	mitochondrion	87.61	88.02
KXG38941	Sorghum	mitochondrion	74.31	74.48
TraesCS1A01G211100.1	Wheat	peroxisome	72.94	70.2
TraesCS1D01G214400.1	Wheat	peroxisome	64.45	55.21
EER91959	Sorghum	mitochondrion	50.92	49.89
Solyc06g062310.2.1	Tomato	cytosol	22.02	49.48
KRH30009	Soybean	endoplasmic reticulum, mitochondrion	50.23	49.44
Solyc05g050920.2.1	Tomato	cytosol	47.71	49.29
Solyc05g050910.2.1	Tomato	cytosol, nucleus, peroxisome	48.39	48.62
KRH20786	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.17	47.84
VIT_13s0019g00620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.39	46.27
VIT_13s0019g00660.t01	Wine grape	mitochondrion	48.17	45.75
OQU92170	Sorghum	cytosol	38.07	44.99
EER97845	Sorghum	cytosol	40.83	42.18
Os10t0554300-00	Rice	cytosol, peroxisome, plastid	46.79	42.15
VIT_00s0131g00120.t01	Wine grape	cytosol	24.77	41.38
KXG40414	Sorghum	cytosol	36.24	41.04
OQU88310	Sorghum	cytosol, mitochondrion	39.68	40.71
EER95747	Sorghum	cytosol	41.05	37.84
Solyc06g062320.1.1	Tomato	cytosol	10.09	33.59
CDY27691	Canola	cytosol	10.78	33.57

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	EntrezGene:8058744	UniProt:C5WSH2	ncoils:Coil	EnsemblPlants:EER94515
ProteinID:EER94515	ProteinID:EER94515.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188
PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF138	EnsemblPlantsGene:SORBI_3001G302500
SUPFAM:SSF51905	UniParc:UPI0001A82FAA	RefSeq:XP_002467517.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:58513580..58516294

Molecular Weight (calculated)

48656.5 Da

IEP (calculated)

5.440

GRAVY (calculated)

-0.319

Length

436 amino acids

Sequence
(BLAST)

001: MPRTVAVVGA GPAGLVAARE LLRDDHAVAV FEKSGRVGGT WAYDPRADAD PLGRDPGAPG AVHGSLYASL RTNLPREIMG FSGFPLEGRV FAGDPRTFPG
101: HREMLAFLDT FAVDSGVAPH VRLGAEVLRV RRPLCRGQGE QWAVAWRGED GEVTEEAFDA VVVCSGHCSV PLVLEIRGIN KWQGKQMHSH NYRTPEPFQD
201: QSVVVVGLGA SGIDIASEIS HVAKEVHIAA RYSEDRLGKI ELYHNAWMHG EIECIQDDGQ VRFAEGSSVA ADTILYCTGY RYHFPFLDLD GFTVDDNRVG
301: PLYKHVFPPK YAPNLSFVGL PYKSIIFQSL ELESKWVAAL LSGRAALPSE EDMMADVQAE YQRMEDAGKP KRHTHTLWPR WVEYLNWLAD QVGEPHVEPR
401: RSEMYEKALR CVWSLDVGYR DRWEEENIDS GSPPWF

Best Arabidopsis Sequence Match ( AT1G12200.1 )
(BLAST)

001: MATSHPDPTT SRHVAVIGAG AAGLVAAREL RREGHSVVVL ERGSQIGGVW AYTSQVEPDP LSLDPTRPVV HSSLYRSLRT NIPRECMGFT DFPFATRPHD
101: GSRDPRRHPA HTEVLAYLRD FAKEFDIEEM VRFETEVVKA EQVAAEGEER GKWRVESRSS DGVVDEIYDA VVVCNGHYTE PRHALITGID SWPGKQIHSH
201: NYRVPDQFKD QVVIVIGSSA SGVDICRDIA QVAKEVHVSS RSTSPDTYEK LTGYENLWLH STIQIAREDG SVVFENGKTI YADTIMHCTG YKYYFPFLDT
301: KGEVTVDDNR VGPLYKHVFP PALAPSLSFI GLPWQITPFP MFELQSKWVA AVLSGRVSLP SQDEMMEDTK AFYDKLEASG IPKRYTHLMP DDSQFEYDNW
401: LADQCEYPRI EKWREQMFYI GFKRIYAQSS TYRDNWDDDH LIVEAYDDFV KFMSSYQELL PMLKT

Arabidopsis Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178W1K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.