Factsheet for TraesCS1B01G006200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G006000.1	Wheat	mitochondrion	85.2	94.06
TraesCS6A01G120500.2	Wheat	cytosol	81.17	75.1
TraesCS6B01G178800.1	Wheat	cytosol	78.7	72.37
TraesCS6D01G110300.1	Wheat	cytosol	81.17	71.97
TraesCS6B01G148900.1	Wheat	cytosol	78.92	68.75
TraesCSU01G087500.1	Wheat	cytosol	80.72	67.54
TraesCS4B01G269700.1	Wheat	cytosol	69.28	62.42
TraesCS5B01G194300.1	Wheat	cytosol	64.35	60.42
TraesCS3B01G014100.2	Wheat	cytosol	69.96	60.23
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	55.16	54.07
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	55.16	54.07
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	54.93	53.96
TraesCS5B01G531000.1	Wheat	cytosol	58.74	52.93
Bra012971.1-P	Field mustard	cytosol	54.04	52.39
Bra012970.1-P	Field mustard	cytosol	52.47	52.35
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	53.36	51.85
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	52.47	51.66
CDY40773	Canola	mitochondrion	53.14	51.63
TraesCS5B01G297400.1	Wheat	cytosol	53.36	51.52
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	52.24	51.43
Bra028683.1-P	Field mustard	mitochondrion	52.91	51.42
AT5G07800.1	Thale cress	cytosol	52.91	51.3
CDY23071	Canola	cytosol	53.14	51.3
CDY02157	Canola	cytosol	52.91	51.08
AT5G61290.1	Thale cress	cytosol	52.69	50.98
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	52.69	50.98
CDY02158	Canola	cytosol	45.74	50.87
CDY23072	Canola	cytosol	45.52	50.62
TraesCS5B01G530900.1	Wheat	cytosol	58.74	50.58
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	12.56	49.12
TraesCS4B01G370500.1	Wheat	mitochondrion	42.15	42.34
TraesCS4B01G370200.1	Wheat	mitochondrion	42.83	41.25
TraesCS4B01G366800.1	Wheat	plastid	42.15	40.26
TraesCS4B01G370400.1	Wheat	mitochondrion	42.6	40.25
TraesCS1B01G224600.2	Wheat	cytosol	41.7	37.42
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	53.59	22.42

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS1B01G006200	EnsemblPlants:TraesCS1B01G006200.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:3906680..3909869

Molecular Weight (calculated)

49466.1 Da

IEP (calculated)

5.796

GRAVY (calculated)

-0.209

Length

446 amino acids

Sequence
(BLAST)

001: MVGNGIEAPS QRKKVCVIGA GMAGLASARE LRREGQDVMV LEQRGDVGGQ WLYDPRVDGT DPLGASEPVK VHSSLYASLR LISARETMGF TDFPFAPKPK
101: DGRDSRRFPD FCDAFGLIEL VRLNTSAARV ALAPGPTPTR QWTVSSVDLG KCNGTEEEEE VFDAVVVANG HYSQPILPTI KGMQVWRGRQ MHSHSYRVPE
201: QFRDEVVVVV GCGLSGMEIA MEVRGVAKEV HLVAKSMEEV TQGLAKVLAK HSVSLHLQLH VERLCPDGRV VFGDGSSVLA DTVIYCTGYN YAFPFLDTEG
301: AVTNDDNRVG PLFEHVFPPT LAPSLSFIGI PKKVFAPWFF EAQAKWVAHV LSGKRTLPPE EVMMRSVEEF YHARDIAGVP KKFTHGVSLF DITYKNEFGC
401: KYCDFPGVEK WRQELLMSTL ANMVDNLETF RDDYQDSDSI RKGVEE

Best Arabidopsis Sequence Match ( AT1G12200.1 )
(BLAST)

001: MATSHPDPTT SRHVAVIGAG AAGLVAAREL RREGHSVVVL ERGSQIGGVW AYTSQVEPDP LSLDPTRPVV HSSLYRSLRT NIPRECMGFT DFPFATRPHD
101: GSRDPRRHPA HTEVLAYLRD FAKEFDIEEM VRFETEVVKA EQVAAEGEER GKWRVESRSS DGVVDEIYDA VVVCNGHYTE PRHALITGID SWPGKQIHSH
201: NYRVPDQFKD QVVIVIGSSA SGVDICRDIA QVAKEVHVSS RSTSPDTYEK LTGYENLWLH STIQIAREDG SVVFENGKTI YADTIMHCTG YKYYFPFLDT
301: KGEVTVDDNR VGPLYKHVFP PALAPSLSFI GLPWQITPFP MFELQSKWVA AVLSGRVSLP SQDEMMEDTK AFYDKLEASG IPKRYTHLMP DDSQFEYDNW
401: LADQCEYPRI EKWREQMFYI GFKRIYAQSS TYRDNWDDDH LIVEAYDDFV KFMSSYQELL PMLKT

Arabidopsis Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178W1K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.