Factsheet for TraesCS4D01G269000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G269700.1	Wheat	cytosol	90.54	90.91
HORVU4Hr1G072260.1	Barley	cytosol	86.32	85.46
TraesCS3D01G000800.1	Wheat	cytosol	82.7	79.65
TraesCS6D01G110500.1	Wheat	cytosol	68.81	71.7
TraesCS6D01G110300.1	Wheat	cytosol	68.81	67.99
TraesCS7D01G425900.1	Wheat	cytosol	62.58	63.86
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	52.11	56.92
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	51.91	56.7
Bra012970.1-P	Field mustard	cytosol	49.5	55.03
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	50.5	54.68
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	49.9	54.63
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	49.5	54.3
CDY40773	Canola	mitochondrion	50.1	54.25
Bra012971.1-P	Field mustard	cytosol	50.1	54.13
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	49.09	53.86
Bra028683.1-P	Field mustard	mitochondrion	49.7	53.81
AT5G07800.1	Thale cress	cytosol	49.7	53.7
CDY23072	Canola	cytosol	43.26	53.62
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	49.7	53.58
CDY23071	Canola	cytosol	49.7	53.46
CDY02157	Canola	cytosol	49.7	53.46
CDY02158	Canola	cytosol	43.06	53.37
AT5G61290.1	Thale cress	cytosol	48.49	52.28
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	11.27	49.12
TraesCS4D01G360800.1	Wheat	cytosol	29.18	45.6
TraesCS4D01G361000.1	Wheat	cytosol	40.85	44.03
TraesCS6D01G139800.1	Wheat	mitochondrion	39.44	43.56
TraesCS4D01G360900.1	Wheat	cytosol	40.64	41.82
TraesCS1D01G213900.2	Wheat	peroxisome	38.43	38.51
TraesCS1D01G214400.1	Wheat	peroxisome	33.6	32.81
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	50.91	23.73

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS4D01G269000	EnsemblPlants:TraesCS4D01G269000.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:439818826..439820613

Molecular Weight (calculated)

54975.0 Da

IEP (calculated)

6.164

GRAVY (calculated)

-0.327

Length

497 amino acids

Sequence
(BLAST)

001: MDTACGSDPP QSKKVCVIGA GMAGLAAARE LRREGHDVTV LEQSGDVGGQ WLYDPRTDAA DPLGVAAPVK VHSSMYASLR LISPRQSTGF TDFPFCPKSG
101: RDDRRFPGHR EVDLYLKDFC DAFGLMDAVR LNTRVLRAAM TPARRWAVRS VDLGVGECDG ADEKKLDAYV DEVFDAVVVA TGHYSQPRLP SIKGIETWRG
201: RQMHSHSYRV PEPFRGEVVV VVGCGESGKD IAMEIRGVAK EVYLVAGSME AVTPGLSKVL AKHSANLHLR LEVERLCEDG RVAFKDGGGS SSSVAADTVI
301: YCTGYSYSFP FLETGGAVTV DDNRVGPLFE HVFPPSLAPS LSFVGVPRKI FAPRFFEIQA RWVAQVLSGR RALPAEEEMR RSVEEFYRAR DAAGVPRKYT
401: HEIGRREPTY MDDFGEKYCD FPRVEGWRHE LLGSFVRGMM ENLETFRDDY QDSDSIHRAM QEWHLSCVQS SPPSCCSYAE SQAAVPAQLV SVNQHND

Best Arabidopsis Sequence Match ( AT1G62560.1 )
(BLAST)

001: MAPAQNQITS KHVAVIGAGP AGLITSRELR REGHSVVVFE REKQVGGLWV YTPKSDSDPL SLDPTRSKVH SSIYESLRTN VPRESMGVRD FPFLPRFDDE
101: SRDARRYPNH REVLAYIQDF AREFKIEEMI RFETEVVRVE PVDNGNWRVQ SKNSGGFLED EIYDAVVVCN GHYTEPNIAH IPGIKSWPGK QIHSHNYRVP
201: DPFENEVVVV IGNFASGADI SRDIAKVAKE VHIASRAREP HTYEKISVPQ NNLWMHSEID TTHEDGSIVF KNGKVIFADS IVYCTGYKYN FPFLETNGYL
301: RIDEKRVEPL YKHVFPPALA PGLAFVGLPA MGIVFVMFEI QSKWVAAVLS GRVTLPSTDK MMEDINAWYA SLDALGIPKR HTHTIGRIQS EYLNWVAKES
401: GCELVERWRG QEVDGGYLRL VAHPETYRDE WDDDELIEEA YNDFSRKKLI SVDPSYYLEN GR

Arabidopsis Description

FMOGS-OX3Flavin-containing monooxygenase FMO GS-OX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXE1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.