Factsheet for Zm00001d018652_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d020359_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	Zm00001d020359_P003	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88310	Sorghum	cytosol, mitochondrion	72.96	81.88
Zm00001d018650_P001	Maize	cytosol	69.18	71.27
Zm00001d018648_P001	Maize	cytosol	69.6	66.67
Zm00001d018649_P001	Maize	cytosol	64.15	63.49
Os07t0112000-00	Rice	cytosol	62.26	62.0
Os07t0111900-00	Rice	extracellular	61.84	61.97
Os07t0111700-01	Rice	cytosol, peroxisome	60.17	61.46
Os06t0528700-01	Rice	plasma membrane	60.8	59.79
Os01t0368000-00	Rice	cytosol	56.6	58.95
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	49.27	51.65
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	48.85	51.21
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	48.64	51.1
Bra012970.1-P	Field mustard	cytosol	47.59	50.78
CDY23071	Canola	cytosol	49.06	50.65
AT5G61290.1	Thale cress	cytosol	48.64	50.33
Bra012971.1-P	Field mustard	cytosol	48.43	50.22
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	47.59	50.11
CDY02157	Canola	cytosol	48.43	50.0
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	47.38	49.89
CDY40773	Canola	mitochondrion	47.8	49.67
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	47.8	49.67
Bra028683.1-P	Field mustard	mitochondrion	47.59	49.46
CDY02158	Canola	cytosol	41.51	49.38
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	47.38	49.02
CDY23072	Canola	cytosol	40.88	48.63
AT5G07800.1	Thale cress	cytosol	46.75	48.48
Zm00001d029924_P001	Maize	mitochondrion	41.09	45.16
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	10.69	44.74
Zm00001d029865_P001	Maize	mitochondrion	40.46	43.86
Zm00001d027286_P001	Maize	cytosol	32.08	39.95
Zm00001d046637_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	10.06	39.67
Zm00001d029922_P001	Maize	mitochondrion	36.48	36.33
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	49.48	22.14

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	UniProt:A0A1D6HR94	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114
InterPro:IPR036188	ProteinID:ONM51033.1	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00370	PFscan:PS51257
PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	UniParc:UPI0008424E8D	EnsemblPlantsGene:Zm00001d018652	EnsemblPlants:Zm00001d018652_P001
EnsemblPlants:Zm00001d018652_T001	SEG:seg	:	:	:	:

Description

FAD/NAD(P)-binding oxidoreductase family protein

Coordinates

chr7:-:1879820..1881396

Molecular Weight (calculated)

52858.5 Da

IEP (calculated)

6.268

GRAVY (calculated)

-0.262

Length

477 amino acids

Sequence
(BLAST)

001: MVSSKKVCVV GAGVSGLACA RELLREGHDV TVMEQSGGVG GQWLYDPRAD GGDPLGAAGA HSSMYASVRL ISPRELTGFS DFPFFPRDDG TGDSRRYPGH
101: AEFLRYIRDF CDAFGLMDVV RLNTKVLRVG LAAPRAADDG DGIKRWTVSW SRHRGCDGEV VTTEEEVFDA VVVAVGQYTQ PRLPTIRGMD KWSRRQLHSH
201: SYRVPDSFHG EVVVIVGFRH SGVDIALELS KLAREVHVSV KSMEALTPAV SKAVARHSDL HLHLQERKPC SYKSMLQYSL IECLREDGQV TFADGSRVAA
301: DSIIYCTGYD CSFPFLDTGG LVTVDDSRVG PLYEHTFPPA LAPSLSFVGL PRMVLVPRFY EAQARWVAQA LSGWRPLPPS EEMARSAEEY HRAREAAGVP
401: RRLSHALFFD MDYCDEFGAK HCGFPPVEGW KRDLLSLSLA SASDGAVESY RDSYHDSDLV REGLRSEGWW PWLPDPQ

Best Arabidopsis Sequence Match ( AT5G61290.1 )
(BLAST)

001: MVLVITEPIK SQSKTVCVIG AGPSGLVSAR ELKKEGHKVV VMEQNHDVGG QWLYQPNVDE EDTLGKTKTL KVHSSVYSSL RLASPREVMG FSDFPFIAKE
101: GRDSRRFPGH EELLLYLKDF CQVFGLREMI RFNVRVEFVG MVNEDDDDDD DVKKWMVKSV KKSGEVMEEV FDAVVVASGH YSYPRLPTIK GMDLWKRKQL
201: HSHIYRVPEP FCDEVVVVVG CSMSGQDISI ELVEVAKEVH LSTKSLDIPP GLSKVIEKHQ NLHLHPQIES LEEDGRVIFE DGSCIVADTI LYCTGYEYKF
301: PFLESKGRVE IDDNRVGPLF EHTFSPSLSP FLSFVGIPRK LIGFPFFESQ AKWIAKLLSG KTSLPSSDQM MQSISDFYLA READGIPKRN THDIADFNYS
401: DKYADYIGFP HLEEWRKVLC LSAILNSIEN LETYRDSWDD DDLLQETLQD PYFTQLSIPS V

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.