Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07001 | Canola | nucleus | 79.52 | 81.47 |
| CDX93271 | Canola | nucleus | 79.72 | 81.34 |
| Bra017081.1-P | Field mustard | nucleus | 78.53 | 80.37 |
| Bra005052.1-P | Field mustard | nucleus | 77.63 | 78.65 |
| Bra005050.1-P | Field mustard | nucleus | 77.63 | 78.65 |
| CDX74854 | Canola | nucleus | 77.34 | 78.35 |
| CDY44640 | Canola | nucleus | 77.93 | 77.86 |
| VIT_13s0067g03720.t01 | Wine grape | plastid | 31.91 | 63.69 |
| KRG92986 | Soybean | nucleus | 52.78 | 52.78 |
| KRH36229 | Soybean | nucleus | 52.29 | 52.08 |
| Solyc05g054910.2.1 | Tomato | nucleus | 44.93 | 47.03 |
| VIT_13s0067g03680.t01 | Wine grape | nucleus | 18.59 | 46.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.04 | 45.91 |
| Os05t0462600-01 | Rice | mitochondrion | 36.48 | 43.95 |
| TraesCS1D01G286500.8 | Wheat | nucleus | 40.16 | 41.87 |
| HORVU1Hr1G071780.21 | Barley | nucleus | 39.86 | 41.55 |
| TraesCS1B01G297000.5 | Wheat | nucleus | 39.66 | 41.18 |
| OQU87820 | Sorghum | nucleus | 38.27 | 41.09 |
| TraesCS1A01G287600.8 | Wheat | nucleus | 39.56 | 41.07 |
| Os01t0836400-02 | Rice | nucleus | 35.69 | 39.28 |
| OQU78144 | Sorghum | nucleus | 38.67 | 38.9 |
| Zm00001d010546_P003 | Maize | nucleus | 39.36 | 38.3 |
| TraesCS3A01G354400.3 | Wheat | nucleus | 40.26 | 37.5 |
| Zm00001d038393_P012 | Maize | nucleus | 37.18 | 36.42 |
| TraesCS3D01G348300.1 | Wheat | cytosol | 39.86 | 36.22 |
| TraesCS3B01G387400.1 | Wheat | nucleus | 39.86 | 35.77 |
| Zm00001d003061_P001 | Maize | nucleus | 4.27 | 34.96 |
| HORVU3Hr1G087140.16 | Barley | nucleus, plastid | 39.66 | 33.93 |
| HORVU1Hr1G029080.1 | Barley | extracellular | 5.67 | 33.53 |
Protein Annotations
| Gene3D:1.25.40.990 | MapMan:16.11.2.1 | EntrezGene:818519 | ProteinID:AAC28976.1 | ProteinID:AEC09663.1 | EMBL:AK222197 |
| ArrayExpress:AT2G39340 | EnsemblPlantsGene:AT2G39340 | RefSeq:AT2G39340 | TAIR:AT2G39340 | RefSeq:AT2G39340-TAIR-G | EnsemblPlants:AT2G39340.1 |
| TAIR:AT2G39340.1 | UniProt:F4IUY8 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 | InterPro:IPR000717 | RefSeq:NP_181466.2 |
| InterPro:PCI_dom | PFAM:PF03399 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PFscan:PS50250 | PANTHER:PTHR12436 | PANTHER:PTHR12436:SF28 | InterPro:SAC3/GANP/THP3 | SUPFAM:SSF55486 | UniParc:UPI000034EE46 |
| SEG:seg | : | : | : | : | : |
Description
SAC3ASAC3 family protein A [Source:UniProtKB/Swiss-Prot;Acc:F4IUY8]
Coordinates
chr2:+:16423541..16430108
Molecular Weight (calculated)
111266.0 Da
IEP (calculated)
6.769
GRAVY (calculated)
-0.848
Length
1006 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNHGGNTQAV APMDPNSIEN RYGVDGSQTQ KYSYQYSTGS ESAPWTGHSV ENQAVENGNY SNSNYYHPQP TGPATGNVQE IPNTVSFTIS STSGTANVAQ
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.