Factsheet for VIT_13s0067g01060.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0067g02460.t01	Wine grape	cytosol	79.72	96.55
VIT_13s0067g02370.t01	Wine grape	endoplasmic reticulum, golgi	97.51	80.35
VIT_13s0067g02620.t01	Wine grape	mitochondrion, plastid	96.8	66.83
VIT_13s0067g01430.t01	Wine grape	plastid	97.15	64.39
VIT_13s0067g01260.t01	Wine grape	plastid	95.37	61.33
VIT_18s0041g00180.t01	Wine grape	mitochondrion	29.54	54.97
KRH20594	Soybean	plastid	65.12	45.19
CDX67598	Canola	plastid	59.43	43.49
Bra003181.1-P	Field mustard	mitochondrion, plastid	59.43	43.38
CDY07542	Canola	plastid	59.43	43.15
PGSC0003DMT400005365	Potato	plastid	63.7	42.93
Solyc06g061120.2.1	Tomato	plastid	61.92	41.73
AT3G54380.1	Thale cress	mitochondrion	59.07	40.89
GSMUA_Achr8P09880_001	Banana	nucleus	58.72	40.54
Zm00001d047474_P003	Maize	mitochondrion	51.6	36.43
KRH13256	Soybean	plastid	47.69	36.22
KXG39369	Sorghum	nucleus	50.53	36.04
TraesCS1B01G271000.1	Wheat	cytosol	47.69	34.36
TraesCS1D01G260400.1	Wheat	cytosol	47.69	34.36
HORVU4Hr1G048800.3	Barley	cytosol, peroxisome	48.75	32.08
Os03t0352200-01	Rice	plasma membrane	4.27	6.82
VIT_05s0020g02350.t01	Wine grape	nucleus	29.89	5.54

Protein Annotations

ArrayExpress:VIT_13s0067g01060	EMBL:FN596756	EnsemblPlants:VIT_13s0067g01060.t01	EnsemblPlantsGene:VIT_13s0067g01060	Gene3D:1.25.40.990	InterPro:SAC3/GANP/THP3
PANTHER:PTHR12436	PANTHER:PTHR12436:SF3	PFAM:PF03399	ProteinID:CBI40622	ProteinID:CBI40622.3	SEG:seg
UniParc:UPI00015CD61F	UniProt:D7UD07	MapMan:16.11.2.1	:	:	:

Description

No Description!

Coordinates

chr13_random:+:594998..602589

Molecular Weight (calculated)

32873.8 Da

IEP (calculated)

7.574

GRAVY (calculated)

-0.213

Length

281 amino acids

Sequence
(BLAST)

001: MQASDVRPLP VLEETLNYLL NLLDATEHPF EVVHDFVFDR TRSIRQDLSM QNIINDQTIH MFEEMVKFHI ISHHKLHSCS SKPSFSSVHY LNMEQLKKCL
101: ISLYALYKEN RNSNSIYKNE PEFYSFHVLL HLGSNNQPLG ESLSLWLGRV PSLILKSKEM CFARRLLRLF RMGNYKRFLC TTATEASYLQ YYIIEPYINE
201: VRALALSCVN YCGYKLHPYP IAHLSKLLMM KELDVESFCN ACGLETSTDE RGNKFLSTKQ TNFHYPKEVF PSYCLLGLEH F

Best Arabidopsis Sequence Match ( AT3G54380.1 )
(BLAST)

001: MNRRNRGSSS SSSRVSNTYG NRQFSDNPRT GSGGGVNESF QRRSDAPHKR NNEKDESKHK DEDPADVSLI VGTCSSMCPE RERVTRERLR DLAVFERLYG
101: NPSKSSTEIA VKKFCRTLSA ADVQASDVRP LPVLEETLRY LLSLLDSKEH PFEVVHDFIF DRTRSIRQDL SIQNLANERV IYLYEEMVKF HVISHERLQS
201: CSGTSISSMH HLNMEQLAKT LTSLYNIYDA NRKPDYIYEN EAEFRSLYVL LHLNPSSGVM GEPLSLWFRK LTFALVKSKE ICFVRNLLRL YRMGNYKNFL
301: SRTASEATYL QYCISEHHIR EMRLVAVQYI NNVCYKLQPY PLLRLSQNLK MKELDVESLC HECGLETCTD PDGFTVLPVK QSTFRSPEDK FKVYDLIGIE
401: RIKMSI

Arabidopsis Description

SAC3CSAC3 family protein C [Source:UniProtKB/Swiss-Prot;Acc:Q67XV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.