Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 5
- plasma membrane 1
- mitochondrion 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038457.1-P | Field mustard | extracellular, plastid, vacuole | 37.36 | 47.55 |
| Bra012722.1-P | Field mustard | plastid | 44.51 | 45.0 |
| CDX90527 | Canola | plastid | 44.51 | 45.0 |
| PGSC0003DMT400034588 | Potato | mitochondrion, plasma membrane | 43.41 | 44.38 |
| KRH01971 | Soybean | plasma membrane, plastid | 40.66 | 44.31 |
| Solyc11g012640.1.1 | Tomato | mitochondrion, plasma membrane | 42.86 | 43.82 |
| CDY09697 | Canola | plastid | 43.41 | 43.65 |
| KRH51183 | Soybean | plastid | 41.21 | 43.1 |
| AT4G16410.1 | Thale cress | plastid | 41.76 | 41.08 |
| Zm00001d037361_P001 | Maize | mitochondrion | 41.76 | 39.58 |
| Zm00001d045742_P001 | Maize | extracellular | 41.76 | 38.78 |
| EER88230 | Sorghum | mitochondrion | 41.76 | 38.38 |
| Os07t0607200-01 | Rice | plastid | 39.56 | 36.73 |
| CDY32241 | Canola | endoplasmic reticulum, extracellular, plastid | 22.53 | 34.45 |
| VIT_00s1543g00010.t01 | Wine grape | plasma membrane | 44.51 | 29.03 |
| VIT_00s0194g00160.t01 | Wine grape | plasma membrane | 43.96 | 28.67 |
| TraesCS7D01G161000.1 | Wheat | plastid | 40.11 | 23.62 |
| TraesCS7A01G160300.1 | Wheat | plastid | 39.56 | 23.38 |
| TraesCS7B01G065200.1 | Wheat | plastid | 39.01 | 22.05 |
| HORVU7Hr1G033500.6 | Barley | plastid | 39.01 | 20.46 |
| CDY34464 | Canola | cytosol | 31.87 | 17.85 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P24520_001 | EnsemblPlants:GSMUA_Achr6T24520_001 | EnsemblPlantsGene:GSMUA_Achr6G24520_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Uncharacterised_Ycf33 | PANTHER:PTHR36049 | PFAM:PF05421 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000296D6D8 |
| UniProt:M0T9U8 | MapMan:35.2 | : | : | : | : |
Description
Putative Uncharacterized protein ycf33 [Source:GMGC_GENE;Acc:GSMUA_Achr6G24520_001]
Coordinates
chr6:+:25351408..25351956
Molecular Weight (calculated)
19732.2 Da
IEP (calculated)
6.955
GRAVY (calculated)
0.125
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MNCVLHLKPH LRISMNGHRP VRSPTPPSPP PPPPSKLQSN SSPLNHAPTA ATVKSEAPTP VEKEKSEAIP DAELPRWLLL GGASLGLALL LMGIDPQRQA
101: LALGPEGPLM EEFWDNVRRY VLYALTVSTG AIYTISQPII ELLKNPITAV LIVVLLAGAF YLLSQVLSAM VGISEFSYDY SY
101: LALGPEGPLM EEFWDNVRRY VLYALTVSTG AIYTISQPII ELLKNPITAV LIVVLLAGAF YLLSQVLSAM VGISEFSYDY SY
001: MTMMSLPKMR LSCLQPHLHF TSSRSIAAAL AFPSSSIRNR TSCLVRCGSA RRRLTTKSSR NSKLERAQPP PLGLERHWRY AVVGGVSVGL MMVLVLGMDA
101: EKAMALGPEG PLMEEFWDNV RRYGLYALTV STGALSAVFE PIFELLKNPI SAILILLILG GSFYIVSQVV SAMIGVNEFA YQYSY
101: EKAMALGPEG PLMEEFWDNV RRYGLYALTV STGALSAVFE PIFELLKNPI SAILILLILG GSFYIVSQVV SAMIGVNEFA YQYSY
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q8VZK4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.