Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- cytosol 1
- endoplasmic reticulum 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045742_P001 | Maize | extracellular | 78.65 | 77.04 |
| EER88230 | Sorghum | mitochondrion | 70.83 | 68.69 |
| Os07t0607200-01 | Rice | plastid | 52.6 | 51.53 |
| GSMUA_Achr6P24520_001 | Banana | mitochondrion | 39.58 | 41.76 |
| KRH51183 | Soybean | plastid | 36.98 | 40.8 |
| KRH01971 | Soybean | plasma membrane, plastid | 34.38 | 39.52 |
| Bra038457.1-P | Field mustard | extracellular, plastid, vacuole | 28.65 | 38.46 |
| CDX90527 | Canola | plastid | 34.38 | 36.67 |
| Bra012722.1-P | Field mustard | plastid | 34.38 | 36.67 |
| CDY09697 | Canola | plastid | 34.38 | 36.46 |
| PGSC0003DMT400034588 | Potato | mitochondrion, plasma membrane | 32.81 | 35.39 |
| Solyc11g012640.1.1 | Tomato | mitochondrion, plasma membrane | 32.29 | 34.83 |
| AT4G16410.1 | Thale cress | plastid | 33.33 | 34.59 |
| TraesCS7A01G160300.1 | Wheat | plastid | 44.27 | 27.6 |
| TraesCS7D01G161000.1 | Wheat | plastid | 44.27 | 27.51 |
| TraesCS7B01G065200.1 | Wheat | plastid | 43.23 | 25.78 |
| CDY32241 | Canola | endoplasmic reticulum, extracellular, plastid | 15.62 | 25.21 |
| HORVU7Hr1G033500.6 | Barley | plastid | 43.75 | 24.21 |
| VIT_00s0194g00160.t01 | Wine grape | plasma membrane | 34.38 | 23.66 |
| VIT_00s1543g00010.t01 | Wine grape | plasma membrane | 33.85 | 23.3 |
| CDY34464 | Canola | cytosol | 27.08 | 16.0 |
Protein Annotations
| EMBL:BT062982 | EMBL:EU959222 | EnsemblPlants:Zm00001d037361_P001 | EnsemblPlants:Zm00001d037361_T001 | EnsemblPlantsGene:Zm00001d037361 | EntrezGene:100275996 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Uncharacterised_Ycf33 | ncoils:Coil | PANTHER:PTHR36049 |
| PFAM:PF05421 | ProteinID:AQK83738.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000182C5C9 | UniProt:B6T2K7 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:122861914..122862492
Molecular Weight (calculated)
20172.5 Da
IEP (calculated)
6.884
GRAVY (calculated)
0.257
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQLSLLHHL HRLSPGRGHG LTAVVRAGLS SCEPPTPQQH AKRLLAIAPH ESIAAAREEE SHLRQELAAA GNNNEAGGGG RTCALPTWAL LGGITVGVTV
101: ALALSAGPGP ALALGPEGPL VEEFWDNMRR YALYVVTVST GVAYTVLQPI VELLKNPVTA LLIVAVIAGS GFLVSQVLNA MVGNSDFIYR YE
101: ALALSAGPGP ALALGPEGPL VEEFWDNMRR YALYVVTVST GVAYTVLQPI VELLKNPVTA LLIVAVIAGS GFLVSQVLNA MVGNSDFIYR YE
001: MTMMSLPKMR LSCLQPHLHF TSSRSIAAAL AFPSSSIRNR TSCLVRCGSA RRRLTTKSSR NSKLERAQPP PLGLERHWRY AVVGGVSVGL MMVLVLGMDA
101: EKAMALGPEG PLMEEFWDNV RRYGLYALTV STGALSAVFE PIFELLKNPI SAILILLILG GSFYIVSQVV SAMIGVNEFA YQYSY
101: EKAMALGPEG PLMEEFWDNV RRYGLYALTV STGALSAVFE PIFELLKNPI SAILILLILG GSFYIVSQVV SAMIGVNEFA YQYSY
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q8VZK4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.