Factsheet for HORVU7Hr1G033500.6

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G16410.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT4G16410.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT4G16410.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT4G16410.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT4G16410.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT4G16410.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT4G16410.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT4G16410.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G161000.1	Wheat	plastid	75.79	85.11
TraesCS7A01G160300.1	Wheat	plastid	74.93	84.42
TraesCS7B01G065200.1	Wheat	plastid	72.05	77.64
Zm00001d045742_P001	Maize	extracellular	25.65	45.41
EER88230	Sorghum	mitochondrion	25.36	44.44
Zm00001d037361_P001	Maize	mitochondrion	24.21	43.75
Os07t0607200-01	Rice	plastid	24.21	42.86
Bra038457.1-P	Field mustard	extracellular, plastid, vacuole	17.29	41.96
GSMUA_Achr6P24520_001	Banana	mitochondrion	20.46	39.01
CDY09697	Canola	plastid	19.88	38.12
Bra012722.1-P	Field mustard	plastid	19.6	37.78
CDX90527	Canola	plastid	19.6	37.78
KRH01971	Soybean	plasma membrane, plastid	17.87	37.13
PGSC0003DMT400034588	Potato	mitochondrion, plasma membrane	18.73	36.52
Solyc11g012640.1.1	Tomato	mitochondrion, plasma membrane	18.73	36.52
AT4G16410.1	Thale cress	plastid	19.31	36.22
KRH51183	Soybean	plastid	17.0	33.91
CDY32241	Canola	endoplasmic reticulum, extracellular, plastid	10.66	31.09
VIT_00s0194g00160.t01	Wine grape	plasma membrane	19.88	24.73
VIT_00s1543g00010.t01	Wine grape	plasma membrane	19.88	24.73
CDY34464	Canola	cytosol	19.02	20.31

Protein Annotations

KEGG:00480+1.11.1.15	Gene3D:3.40.30.10	MapMan:35.1	UniProt:A0A287VZ54	InterPro:AhpC/TSA	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016209	GO:GO:0016491	GO:GO:0055114	GO:GO:0098869
EnsemblPlantsGene:HORVU7Hr1G033500	EnsemblPlants:HORVU7Hr1G033500.6	PFAM:PF00578	PFAM:PF05421	PANTHER:PTHR36049	SUPFAM:SSF52833
TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	UniParc:UPI000B46D28D	InterPro:Uncharacterised_Ycf33	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:-:68776588..68778757

Molecular Weight (calculated)

36515.8 Da

IEP (calculated)

9.745

GRAVY (calculated)

-0.101

Length

347 amino acids

Sequence
(BLAST)

001: QNPPFPPHPD DIPSPRTNHP SIPEKPGTRA AAQARVLHPD PGKMAFAAST ACCKPSALLA PRASASSSSQ ARLCRPSTSA AFQGLRAPAP AFALAPAPRR
101: RAASTGIVCG KVSKGSVPPN FTLKDQDGKT VSLSKFKGKP VVLYFYPADE TPGCTKQIFR QKTFTPPGSA GASSPFLSKR HGFATIQAHL SSSPTPTAQQ
201: ETTTIPSQEI TEAATPRRQQ PIKEEAAVAK GDGARTCELP TWAVIGGITA GVAVALALSV DAGPAMALGP EGPLLEEFWD NMRRYGLYAL TVSTGFAWAL
301: VQPIYELLRN PITAVLIILV MAGGAVLTVQ VINAMAGNSD FVYMYEQ

Best Arabidopsis Sequence Match ( AT4G16410.1 )
(BLAST)

001: MTMMSLPKMR LSCLQPHLHF TSSRSIAAAL AFPSSSIRNR TSCLVRCGSA RRRLTTKSSR NSKLERAQPP PLGLERHWRY AVVGGVSVGL MMVLVLGMDA
101: EKAMALGPEG PLMEEFWDNV RRYGLYALTV STGALSAVFE PIFELLKNPI SAILILLILG GSFYIVSQVV SAMIGVNEFA YQYSY

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q8VZK4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.