CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90527	Canola	plastid	95.58	96.11
AT4G16410.1	Thale cress	plastid	66.3	64.86
CDY32241	Canola	endoplasmic reticulum, extracellular, plastid	38.12	57.98
KRH01971	Soybean	plasma membrane, plastid	44.2	47.9
PGSC0003DMT400034588	Potato	mitochondrion, plasma membrane	46.41	47.19
Solyc11g012640.1.1	Tomato	mitochondrion, plasma membrane	45.86	46.63
KRH51183	Soybean	plastid	42.54	44.25
GSMUA_Achr6P24520_001	Banana	mitochondrion	43.65	43.41
Zm00001d045742_P001	Maize	extracellular	38.12	35.2
Zm00001d037361_P001	Maize	mitochondrion	36.46	34.38
EER88230	Sorghum	mitochondrion	35.91	32.83
VIT_00s1543g00010.t01	Wine grape	plasma membrane	46.41	30.11
Os07t0607200-01	Rice	plastid	32.6	30.1
VIT_00s0194g00160.t01	Wine grape	plasma membrane	45.86	29.75
CDY34464	Canola	cytosol	41.99	23.38
TraesCS7A01G160300.1	Wheat	plastid	38.12	22.4
TraesCS7D01G161000.1	Wheat	plastid	38.12	22.33
TraesCS7B01G065200.1	Wheat	plastid	36.46	20.5
HORVU7Hr1G033500.6	Barley	plastid	38.12	19.88

Protein Annotations

EnsemblPlants:CDY09697	EnsemblPlantsGene:GSBRNA2T00031366001	GO:A0A078F9F2	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Uncharacterised_Ycf33	PANTHER:PTHR36049	PFAM:PF05421	ProteinID:CDY09697	ProteinID:CDY09697.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0004EEE09C	UniProt:A0A078F9F2	MapMan:35.2	:	:

Description

BnaC07g33640DBnaC07g33640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9F2]

Coordinates

chrLK031998:+:495138..495683

Molecular Weight (calculated)

19815.7 Da

IEP (calculated)

9.859

GRAVY (calculated)

0.203

Length

181 amino acids

Sequence
(BLAST)

001: MTMMMMSLPK MKVSSLQPHL HLSSRRLLPG AKVSPSSSIS TRPSCRVQCR RLTVESNRSK LEKTQPLGLE KKQPRQALVT GVSVGLMVAL VMGMDGEKAM
101: ALGPEGPLME EFWDNVRRYG LYALTVSTGA LSAVFEPIFE LLKNPISAVL IVIILGGSFY IVSQVVSAMV GVNEFAYDYG Y

Best Arabidopsis Sequence Match ( AT4G16410.1 )
(BLAST)

001: MTMMSLPKMR LSCLQPHLHF TSSRSIAAAL AFPSSSIRNR TSCLVRCGSA RRRLTTKSSR NSKLERAQPP PLGLERHWRY AVVGGVSVGL MMVLVLGMDA
101: EKAMALGPEG PLMEEFWDNV RRYGLYALTV STGALSAVFE PIFELLKNPI SAILILLILG GSFYIVSQVV SAMIGVNEFA YQYSY

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q8VZK4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.