Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G160300.1 | Wheat | plastid | 93.85 | 94.16 |
| TraesCS7B01G065200.1 | Wheat | plastid | 93.2 | 89.44 |
| HORVU7Hr1G033500.6 | Barley | plastid | 85.11 | 75.79 |
| Zm00001d037361_P001 | Maize | mitochondrion | 27.51 | 44.27 |
| EER88230 | Sorghum | mitochondrion | 28.16 | 43.94 |
| Zm00001d045742_P001 | Maize | extracellular | 27.83 | 43.88 |
| Bra038457.1-P | Field mustard | extracellular, plastid, vacuole | 20.06 | 43.36 |
| Os07t0607200-01 | Rice | plastid | 26.86 | 42.35 |
| GSMUA_Achr6P24520_001 | Banana | mitochondrion | 23.62 | 40.11 |
| CDY09697 | Canola | plastid | 22.33 | 38.12 |
| Bra012722.1-P | Field mustard | plastid | 22.01 | 37.78 |
| CDX90527 | Canola | plastid | 22.01 | 37.78 |
| PGSC0003DMT400034588 | Potato | mitochondrion, plasma membrane | 21.36 | 37.08 |
| KRH01971 | Soybean | plasma membrane, plastid | 19.74 | 36.53 |
| Solyc11g012640.1.1 | Tomato | mitochondrion, plasma membrane | 21.04 | 36.52 |
| AT4G16410.1 | Thale cress | plastid | 21.68 | 36.22 |
| KRH51183 | Soybean | plastid | 19.74 | 35.06 |
| CDY32241 | Canola | endoplasmic reticulum, extracellular, plastid | 12.62 | 32.77 |
| VIT_00s0194g00160.t01 | Wine grape | plasma membrane | 22.33 | 24.73 |
| VIT_00s1543g00010.t01 | Wine grape | plasma membrane | 22.33 | 24.73 |
| CDY34464 | Canola | cytosol | 19.74 | 18.77 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G161000.1 | EnsemblPlantsGene:TraesCS7D01G161000 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016209 | GO:GO:0016491 | GO:GO:0055114 | InterPro:AhpC/TSA |
| InterPro:Thioredoxin-like_sf | InterPro:Uncharacterised_Ycf33 | KEGG:00480+1.11.1.15 | PANTHER:PTHR36049 | PFAM:PF00578 | PFAM:PF05421 |
| SEG:seg | SUPFAM:SSF52833 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7D:-:111064176..111066894
Molecular Weight (calculated)
32467.2 Da
IEP (calculated)
9.621
GRAVY (calculated)
0.071
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFAASTACC KPSVLLAPRA SSSSSSSQAR LCRPSTSAAF HGLRAPASAF ALAPAPRRRA ASAGIVCGKV SKGSVPPNFT LKDQDGKTVS LSKFKGKPVV
101: LYFYPADETP GCTKQIIRQK TFTPLGSAGA SSPLGSPFLS KRHGSTTIQA SLSSPNPTPR QQKHVAMTIP SQEITEAATP RRQQPIDEEA VANGDGRTCE
201: LPTWALIGGI TVGVALALAL SVDAGPAMAL GPEGPLLEEF WDNMRRYGLY ALTVSTGFAW ALVQPIYELL RNPITAVLII VVMAGGAVLT VQVINAMAGN
301: SDFVYMYEQ
101: LYFYPADETP GCTKQIIRQK TFTPLGSAGA SSPLGSPFLS KRHGSTTIQA SLSSPNPTPR QQKHVAMTIP SQEITEAATP RRQQPIDEEA VANGDGRTCE
201: LPTWALIGGI TVGVALALAL SVDAGPAMAL GPEGPLLEEF WDNMRRYGLY ALTVSTGFAW ALVQPIYELL RNPITAVLII VVMAGGAVLT VQVINAMAGN
301: SDFVYMYEQ
001: MTMMSLPKMR LSCLQPHLHF TSSRSIAAAL AFPSSSIRNR TSCLVRCGSA RRRLTTKSSR NSKLERAQPP PLGLERHWRY AVVGGVSVGL MMVLVLGMDA
101: EKAMALGPEG PLMEEFWDNV RRYGLYALTV STGALSAVFE PIFELLKNPI SAILILLILG GSFYIVSQVV SAMIGVNEFA YQYSY
101: EKAMALGPEG PLMEEFWDNV RRYGLYALTV STGALSAVFE PIFELLKNPI SAILILLILG GSFYIVSQVV SAMIGVNEFA YQYSY
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q8VZK4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.