Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 1
- mitochondrion 1
- plasma membrane 3
- nucleus 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G16410.1 | KRG89812 | AT2G41090.1 | 17360592 |
| AT4G16410.1 | KRG94975 | AT2G41090.1 | 17360592 |
| AT4G16410.1 | KRH18664 | AT2G41090.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51183 | Soybean | plastid | 83.23 | 79.89 |
| Bra038457.1-P | Field mustard | extracellular, plastid, vacuole | 42.52 | 49.65 |
| Bra012722.1-P | Field mustard | plastid | 49.7 | 46.11 |
| CDX90527 | Canola | plastid | 49.7 | 46.11 |
| CDY09697 | Canola | plastid | 47.9 | 44.2 |
| AT4G16410.1 | Thale cress | plastid | 48.5 | 43.78 |
| PGSC0003DMT400034588 | Potato | mitochondrion, plasma membrane | 44.91 | 42.13 |
| Solyc11g012640.1.1 | Tomato | mitochondrion, plasma membrane | 43.71 | 41.01 |
| GSMUA_Achr6P24520_001 | Banana | mitochondrion | 44.31 | 40.66 |
| CDY32241 | Canola | endoplasmic reticulum, extracellular, plastid | 25.15 | 35.29 |
| Zm00001d037361_P001 | Maize | mitochondrion | 39.52 | 34.38 |
| Zm00001d045742_P001 | Maize | extracellular | 39.52 | 33.67 |
| EER88230 | Sorghum | mitochondrion | 37.13 | 31.31 |
| Os07t0607200-01 | Rice | plastid | 35.33 | 30.1 |
| VIT_00s0194g00160.t01 | Wine grape | plasma membrane | 45.51 | 27.24 |
| VIT_00s1543g00010.t01 | Wine grape | plasma membrane | 44.91 | 26.88 |
| TraesCS7D01G161000.1 | Wheat | plastid | 36.53 | 19.74 |
| TraesCS7B01G065200.1 | Wheat | plastid | 37.13 | 19.25 |
| TraesCS7A01G160300.1 | Wheat | plastid | 35.33 | 19.16 |
| HORVU7Hr1G033500.6 | Barley | plastid | 37.13 | 17.87 |
| CDY34464 | Canola | cytosol | 32.93 | 16.92 |
Protein Annotations
| EMBL:ACUP02010293 | EnsemblPlants:KRH01971 | EnsemblPlantsGene:GLYMA_17G007100 | EntrezGene:100800026 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Uncharacterised_Ycf33 | PANTHER:PTHR36049 | PFAM:PF05421 | ProteinID:KRH01971 | ProteinID:KRH01971.1 |
| TMHMM:TMhelix | UniParc:UPI000233EDC8 | UniProt:I1MQZ1 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr17:-:617028..617531
Molecular Weight (calculated)
18295.8 Da
IEP (calculated)
8.809
GRAVY (calculated)
0.522
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSVSLRPEL HIPICSSNPP SCVKPIKLVV VSSYGKKLKH PASKLAMTHR EHTTTLPLLK HDSSIVMMGA VCVGILVVVL SEEKALALGP EGPLVEEFWD
101: NVRRYGLYAL TVSTGALYTI FRPIVELLKN PISAIFILLL FGASFFIVSQ VLSAMVGVSE FSYDFGY
101: NVRRYGLYAL TVSTGALYTI FRPIVELLKN PISAIFILLL FGASFFIVSQ VLSAMVGVSE FSYDFGY
001: MTMMSLPKMR LSCLQPHLHF TSSRSIAAAL AFPSSSIRNR TSCLVRCGSA RRRLTTKSSR NSKLERAQPP PLGLERHWRY AVVGGVSVGL MMVLVLGMDA
101: EKAMALGPEG PLMEEFWDNV RRYGLYALTV STGALSAVFE PIFELLKNPI SAILILLILG GSFYIVSQVV SAMIGVNEFA YQYSY
101: EKAMALGPEG PLMEEFWDNV RRYGLYALTV STGALSAVFE PIFELLKNPI SAILILLILG GSFYIVSQVV SAMIGVNEFA YQYSY
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q8VZK4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.