Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G161000.1 | Wheat | plastid | 94.16 | 93.85 |
| TraesCS7B01G065200.1 | Wheat | plastid | 90.26 | 86.34 |
| HORVU7Hr1G033500.6 | Barley | plastid | 84.42 | 74.93 |
| EER88230 | Sorghum | mitochondrion | 28.9 | 44.95 |
| Zm00001d045742_P001 | Maize | extracellular | 28.25 | 44.39 |
| Zm00001d037361_P001 | Maize | mitochondrion | 27.6 | 44.27 |
| Os07t0607200-01 | Rice | plastid | 27.6 | 43.37 |
| Bra038457.1-P | Field mustard | extracellular, plastid, vacuole | 19.48 | 41.96 |
| GSMUA_Achr6P24520_001 | Banana | mitochondrion | 23.38 | 39.56 |
| CDY09697 | Canola | plastid | 22.4 | 38.12 |
| PGSC0003DMT400034588 | Potato | mitochondrion, plasma membrane | 21.75 | 37.64 |
| Bra012722.1-P | Field mustard | plastid | 21.75 | 37.22 |
| CDX90527 | Canola | plastid | 21.75 | 37.22 |
| Solyc11g012640.1.1 | Tomato | mitochondrion, plasma membrane | 21.43 | 37.08 |
| KRH01971 | Soybean | plasma membrane, plastid | 19.16 | 35.33 |
| AT4G16410.1 | Thale cress | plastid | 21.1 | 35.14 |
| KRH51183 | Soybean | plastid | 19.16 | 33.91 |
| CDY32241 | Canola | endoplasmic reticulum, extracellular, plastid | 12.01 | 31.09 |
| VIT_00s0194g00160.t01 | Wine grape | plasma membrane | 22.4 | 24.73 |
| VIT_00s1543g00010.t01 | Wine grape | plasma membrane | 22.4 | 24.73 |
| CDY34464 | Canola | cytosol | 19.48 | 18.46 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G160300.1 | EnsemblPlantsGene:TraesCS7A01G160300 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016209 | GO:GO:0016491 | GO:GO:0055114 | InterPro:AhpC/TSA |
| InterPro:Thioredoxin-like_sf | InterPro:Uncharacterised_Ycf33 | KEGG:00480+1.11.1.15 | PANTHER:PTHR36049 | PFAM:PF00578 | PFAM:PF05421 |
| SEG:seg | SUPFAM:SSF52833 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7A:-:116128201..116130528
Molecular Weight (calculated)
32354.1 Da
IEP (calculated)
9.632
GRAVY (calculated)
0.070
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFAASTACC KPSALLAPRA SSSSPPSQAR LCRPSTSAAF HGLRAPASAF ALAPAPRRRA ASTGIVCGKV SKGSVPPNFT LKDQDGKTVS LSKFKGKPVV
101: LYFYPADETP GCTKQIIRQK TFNPLGSAGA SSPLGSPFLS KRHGSTTVRA GLSSPNPTPQ HHRVAMTIPS EEIMEAATPR RQQPIEEEAV ANGGGRTCEL
201: PTWALIGGIT VGVALALALS VDAGPAMALG PEGPLLEEFW DNMRRYGLYA LTVSTGFAWA LVQPIYELLR NPITAVLIIV VMAGGAVLTV QVINAMAGNS
301: DFVYMYEQ
101: LYFYPADETP GCTKQIIRQK TFNPLGSAGA SSPLGSPFLS KRHGSTTVRA GLSSPNPTPQ HHRVAMTIPS EEIMEAATPR RQQPIEEEAV ANGGGRTCEL
201: PTWALIGGIT VGVALALALS VDAGPAMALG PEGPLLEEFW DNMRRYGLYA LTVSTGFAWA LVQPIYELLR NPITAVLIIV VMAGGAVLTV QVINAMAGNS
301: DFVYMYEQ
001: MTMMSLPKMR LSCLQPHLHF TSSRSIAAAL AFPSSSIRNR TSCLVRCGSA RRRLTTKSSR NSKLERAQPP PLGLERHWRY AVVGGVSVGL MMVLVLGMDA
101: EKAMALGPEG PLMEEFWDNV RRYGLYALTV STGALSAVFE PIFELLKNPI SAILILLILG GSFYIVSQVV SAMIGVNEFA YQYSY
101: EKAMALGPEG PLMEEFWDNV RRYGLYALTV STGALSAVFE PIFELLKNPI SAILILLILG GSFYIVSQVV SAMIGVNEFA YQYSY
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q8VZK4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.