Factsheet for GSMUA_Achr3P21250_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P01120_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12680.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G12680.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G12680.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G12680.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT1G12680.1	GSMUA_Achr11P...	AT2G41090.1	17360592
AT1G12680.1	GSMUA_Achr2P01120_001	AT2G41090.1	17360592
AT1G12680.1	GSMUA_Achr3P09330_001	AT2G41090.1	17360592
AT1G12680.1	GSMUA_Achr3P25040_001	AT2G41090.1	17360592
AT1G12680.1	GSMUA_Achr5P07820_001	AT2G41090.1	17360592
AT1G12680.1	GSMUA_Achr5P27590_001	AT2G41090.1	17360592
AT1G12680.1	GSMUA_Achr6P15990_001	AT2G41090.1	17360592
AT1G12680.1	GSMUA_Achr6P23670_001	AT2G41090.1	17360592
AT1G12680.1	GSMUA_Achr8P05790_001	AT2G41090.1	17360592
AT1G12680.1	GSMUA_Achr9P17280_001	AT2G41090.1	17360592
AT1G12680.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G12680.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G12680.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G12680.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT1G12680.1	GSMUA_Achr11P...	AT5G21274.1	17360592
AT1G12680.1	GSMUA_Achr2P01120_001	AT5G21274.1	17360592
AT1G12680.1	GSMUA_Achr3P09330_001	AT5G21274.1	17360592
AT1G12680.1	GSMUA_Achr3P25040_001	AT5G21274.1	17360592
AT1G12680.1	GSMUA_Achr5P07820_001	AT5G21274.1	17360592
AT1G12680.1	GSMUA_Achr5P27590_001	AT5G21274.1	17360592
AT1G12680.1	GSMUA_Achr6P15990_001	AT5G21274.1	17360592
AT1G12680.1	GSMUA_Achr6P23670_001	AT5G21274.1	17360592
AT1G12680.1	GSMUA_Achr8P05790_001	AT5G21274.1	17360592
AT1G12680.1	GSMUA_Achr9P17280_001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P21240_001	Banana	cytosol	35.9	98.79
TraesCS5D01G252900.1	Wheat	nucleus	58.81	68.81
GSMUA_Achr8P23440_001	Banana	nucleus	63.0	67.29
HORVU5Hr1G069710.1	Barley	nucleus	62.11	62.95
TraesCS5A01G246700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	61.23	62.47
TraesCS5B01G243700.1	Wheat	nucleus	61.45	62.28
Os09t0466900-02	Rice	plastid	61.45	61.59
Zm00001d020776_P002	Maize	cytosol, mitochondrion, nucleus, plastid	60.35	61.3
OQU89636	Sorghum	plastid	49.34	60.54
OQU80661	Sorghum	cytosol	38.99	59.4
CDY31273	Canola	cytosol	42.73	58.26
VIT_18s0001g07070.t01	Wine grape	cytosol	59.03	57.27
CDY16526	Canola	cytosol	55.73	56.1
KRH72420	Soybean	cytosol	54.85	56.08
Solyc01g105670.2.1	Tomato	nucleus	54.63	55.98
KRH16808	Soybean	cytosol	55.07	55.93
KRH62273	Soybean	nucleus	57.49	55.89
CDY57079	Canola	cytosol	56.83	55.84
CDX98048	Canola	cytosol	56.61	55.75
KRH52988	Soybean	nucleus	57.05	55.46
PGSC0003DMT400083734	Potato	cytosol	55.51	55.14
Bra019780.1-P	Field mustard	cytosol	57.49	54.95
AT1G12680.1	Thale cress	cytosol	56.83	54.89
CDY26581	Canola	cytosol	57.05	54.64
Bra026959.1-P	Field mustard	cytosol	56.83	54.43
CDY16025	Canola	cytosol	56.83	54.43
Bra016760.1-P	Field mustard	nucleus	54.41	54.17
PGSC0003DMT400004479	Potato	cytosol, plastid	54.41	54.05
CDY21060	Canola	nucleus	54.19	53.95
Zm00001d031844_P001	Maize	plastid	52.42	50.96
Zm00001d029398_P001	Maize	cytosol, plasma membrane, plastid	22.47	47.66
GSMUA_AchrUn_...	Banana	cytosol	21.59	38.58
GSMUA_Achr5P03930_001	Banana	cytosol	25.33	37.83
GSMUA_Achr2P12320_001	Banana	cytosol	24.23	37.8
GSMUA_Achr4P21890_001	Banana	cytosol	22.69	36.92
GSMUA_Achr5P03940_001	Banana	cytosol	22.69	32.7
GSMUA_Achr4P28690_001	Banana	cytosol	23.79	30.86
GSMUA_Achr1P07970_001	Banana	cytosol	30.18	27.73
GSMUA_Achr2P03300_001	Banana	cytosol	29.07	26.72

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.6	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr3G21250_001	EnsemblPlants:GSMUA_Achr3P21250_001	EnsemblPlants:GSMUA_Achr3T21250_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0SGJ1	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349
PANTHER:PTHR24349:SF180	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000296B7B6	SEG:seg	:	:	:	:

Description

Serine/threonine-protein kinase PEPKR2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G21250_001]

Coordinates

chr3:-:22229936..22235312

Molecular Weight (calculated)

49832.5 Da

IEP (calculated)

8.865

GRAVY (calculated)

-0.197

Length

454 amino acids

Sequence
(BLAST)

001: MRRKRKEIRS SENVGFYLSD DFDKARQIKK KCSEHWKVCP AEKVGSCSRG DEKVGSCGGG TAAGVVMTAP ASGRSAADSP GRGLKRKLGC VESATRIGRK
101: KKLENEYVLG RQIGKGRFGS VRLCWSKVNG EEFACKTLLK NGEETVHREV EIMQHVSGHP GIVTLKAVFE DSKSFHLVME LCSGGRLMDQ MVKEGRYSEC
201: RAAILMKELI LVIKYCHEMG VVHRDIKPEN ILLTTSGKMK LSDFGLAVRV ACGQKLSGVA GSPAYVAPEV LLGDYSEKVD IWAAGVLLHL LLVGGLPFNG
301: GSLEAVFEAI KKTELDFTCG VWESISELAR DLLSRMLTRD VSKRITTDEI LNHSWILFYT KCPSEVMRRK SVRKNIKPII DVERIAAAIS STLSTESSSS
401: KSEEQDGCCF VDALAAAMSR VSISETKRTR LCGPVSPIQQ QCSSNMESNL CTAF

Best Arabidopsis Sequence Match ( AT1G12680.1 )
(BLAST)

001: MRKKRKGSET EGWENLPDDL SCSTASRSSN FRSHFSLEGY ARLKKRCKET EAVESVGSFK RRIAGVATAP PCGASSLVSS GRGLKRKIGC IDVSTQTGRK
101: NKIDDDYVFG RNIGKGKFGS VRICKSRKNG TEFACKTLKK GEETVHREVE IMQHLSGHPR VVTLHAVYEE SDCFHLVMEL CSGGRLIDQM VKVGRYSEQR
201: AANIFKDLML VINYCHEMGV VHRDIKPENI LLTAAGKIQL ADFGLAMRIA KGQTLSGLAG SPAYVAPEVL SENYSEKVDV WSAGVLLYAL LSGVLPFKGD
301: SLDAIFEAIK NVKLDFNTGV WESVSKPARD LLARMLTREE SARITADEVL RHPWILFYTD RTLKTMCIKS KHKSQAGSST CLQNRSPTEK TDLNRADREK
401: KIPSDSPTDS FSNTEEEEDE SGVVDVLVVA IANVRISEPK RSRVCSPTNN PIEQQHSSNL TSTSTLCRAF

Arabidopsis Description

PEPKR2Serine/threonine-protein kinase PEPKR2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W490]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.