Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G246700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 98.45 | 85.84 |
| TraesCS5B01G243700.1 | Wheat | nucleus | 98.2 | 85.04 |
| HORVU5Hr1G069710.1 | Barley | nucleus | 98.2 | 85.04 |
| Os09t0466900-02 | Rice | plastid | 88.14 | 75.5 |
| Zm00001d020776_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 84.54 | 73.38 |
| OQU89636 | Sorghum | plastid | 67.27 | 70.54 |
| GSMUA_Achr8P23440_001 | Banana | nucleus | 67.01 | 61.18 |
| CDY31273 | Canola | cytosol | 51.29 | 59.76 |
| GSMUA_Achr3P21250_001 | Banana | cytosol, nucleus, plastid | 68.81 | 58.81 |
| GSMUA_Achr3P21240_001 | Banana | cytosol | 24.74 | 58.18 |
| KRH62273 | Soybean | nucleus | 65.21 | 54.18 |
| CDY16526 | Canola | cytosol | 62.37 | 53.66 |
| Solyc01g105670.2.1 | Tomato | nucleus | 60.82 | 53.27 |
| KRH52988 | Soybean | nucleus | 63.92 | 53.1 |
| KRH72420 | Soybean | cytosol | 60.57 | 52.93 |
| KRH16808 | Soybean | cytosol | 60.82 | 52.8 |
| CDY57079 | Canola | cytosol | 62.37 | 52.38 |
| VIT_18s0001g07070.t01 | Wine grape | cytosol | 62.89 | 52.14 |
| PGSC0003DMT400083734 | Potato | cytosol | 61.34 | 52.08 |
| CDX98048 | Canola | cytosol | 61.86 | 52.06 |
| CDY26581 | Canola | cytosol | 63.4 | 51.9 |
| CDY16025 | Canola | cytosol | 62.89 | 51.48 |
| Bra026959.1-P | Field mustard | cytosol | 62.89 | 51.48 |
| PGSC0003DMT400004479 | Potato | cytosol, plastid | 60.57 | 51.42 |
| Bra019780.1-P | Field mustard | cytosol | 62.63 | 51.16 |
| Bra016760.1-P | Field mustard | nucleus | 60.05 | 51.1 |
| AT1G12680.1 | Thale cress | cytosol | 61.86 | 51.06 |
| CDY21060 | Canola | nucleus | 59.54 | 50.66 |
| TraesCS6D01G360800.1 | Wheat | cytosol | 29.64 | 40.49 |
| TraesCS6D01G360900.1 | Wheat | cytosol | 29.12 | 39.79 |
| TraesCS2D01G378100.1 | Wheat | cytosol | 29.38 | 39.45 |
| TraesCS6D01G211900.1 | Wheat | cytosol | 28.09 | 37.59 |
| TraesCS7D01G052900.1 | Wheat | cytosol | 37.11 | 27.91 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.10.510.10 | MapMan:18.4.5.6 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR24349 | PANTHER:PTHR24349:SF180 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 |
| SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS5D01G252900 | EnsemblPlants:TraesCS5D01G252900.1 | TIGR:cd05117 | SEG:seg |
Description
No Description!
Coordinates
chr5D:+:358995234..358998717
Molecular Weight (calculated)
42194.8 Da
IEP (calculated)
7.178
GRAVY (calculated)
-0.164
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAPPASGRA APDSPGRGLK RKVGCIESAT RIGRKKRLEA EYELGDEIGQ GKFGSVRICR AKAGGEEFAC KALPKNGEET VHREVEIMQH LSGHPGVVTL
101: KAVFEDADKF YLVMELCSGG RLLDEMARDG TFSEQRAALV IKDLMSVVKY CHEMGVIHRD IKPENILLTK TGKMKLADFG LAARVTNGQK LSGVAGSPAY
201: VAPEVLSGSY SEKVDIWGAG VLLHVLLLGS LPFQGGSLEA VFEAIKTVEL DFNSGPWESM SVLGRDLISR MLDRDVSSRI TADQVLCHPW VLFYTECTLK
301: AVTPNVTNKI VAPKITWDRI RSHCESSASD SSSQRSEDQD ECGIVDALTA AITHVRISEP KRTRLCSPGI PIQQECSSNI KSNLCTAF
101: KAVFEDADKF YLVMELCSGG RLLDEMARDG TFSEQRAALV IKDLMSVVKY CHEMGVIHRD IKPENILLTK TGKMKLADFG LAARVTNGQK LSGVAGSPAY
201: VAPEVLSGSY SEKVDIWGAG VLLHVLLLGS LPFQGGSLEA VFEAIKTVEL DFNSGPWESM SVLGRDLISR MLDRDVSSRI TADQVLCHPW VLFYTECTLK
301: AVTPNVTNKI VAPKITWDRI RSHCESSASD SSSQRSEDQD ECGIVDALTA AITHVRISEP KRTRLCSPGI PIQQECSSNI KSNLCTAF
001: MRKKRKGSET EGWENLPDDL SCSTASRSSN FRSHFSLEGY ARLKKRCKET EAVESVGSFK RRIAGVATAP PCGASSLVSS GRGLKRKIGC IDVSTQTGRK
101: NKIDDDYVFG RNIGKGKFGS VRICKSRKNG TEFACKTLKK GEETVHREVE IMQHLSGHPR VVTLHAVYEE SDCFHLVMEL CSGGRLIDQM VKVGRYSEQR
201: AANIFKDLML VINYCHEMGV VHRDIKPENI LLTAAGKIQL ADFGLAMRIA KGQTLSGLAG SPAYVAPEVL SENYSEKVDV WSAGVLLYAL LSGVLPFKGD
301: SLDAIFEAIK NVKLDFNTGV WESVSKPARD LLARMLTREE SARITADEVL RHPWILFYTD RTLKTMCIKS KHKSQAGSST CLQNRSPTEK TDLNRADREK
401: KIPSDSPTDS FSNTEEEEDE SGVVDVLVVA IANVRISEPK RSRVCSPTNN PIEQQHSSNL TSTSTLCRAF
101: NKIDDDYVFG RNIGKGKFGS VRICKSRKNG TEFACKTLKK GEETVHREVE IMQHLSGHPR VVTLHAVYEE SDCFHLVMEL CSGGRLIDQM VKVGRYSEQR
201: AANIFKDLML VINYCHEMGV VHRDIKPENI LLTAAGKIQL ADFGLAMRIA KGQTLSGLAG SPAYVAPEVL SENYSEKVDV WSAGVLLYAL LSGVLPFKGD
301: SLDAIFEAIK NVKLDFNTGV WESVSKPARD LLARMLTREE SARITADEVL RHPWILFYTD RTLKTMCIKS KHKSQAGSST CLQNRSPTEK TDLNRADREK
401: KIPSDSPTDS FSNTEEEEDE SGVVDVLVVA IANVRISEPK RSRVCSPTNN PIEQQHSSNL TSTSTLCRAF
Arabidopsis Description
PEPKR2Serine/threonine-protein kinase PEPKR2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W490]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.