CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12680.1	KRG89812	AT2G41090.1	17360592
AT1G12680.1	KRG94975	AT2G41090.1	17360592
AT1G12680.1	KRH18664	AT2G41090.1	17360592
AT1G12680.1	KRG89812	AT5G21274.1	17360592
AT1G12680.1	KRG94975	AT5G21274.1	17360592
AT1G12680.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16808	Soybean	cytosol	94.14	93.51
KRH62273	Soybean	nucleus	72.3	68.74
KRH52988	Soybean	nucleus	70.95	67.45
CDY31273	Canola	cytosol	47.07	62.76
VIT_18s0001g07070.t01	Wine grape	cytosol	65.77	62.39
TraesCS5D01G252900.1	Wheat	nucleus	52.93	60.57
CDX98048	Canola	cytosol	61.71	59.44
CDY57079	Canola	cytosol	61.71	59.31
AT1G12680.1	Thale cress	cytosol	62.61	59.15
CDY26581	Canola	cytosol	62.84	58.86
Bra016760.1-P	Field mustard	nucleus	60.36	58.77
CDY16025	Canola	cytosol	62.39	58.44
Bra026959.1-P	Field mustard	cytosol	62.39	58.44
Bra019780.1-P	Field mustard	cytosol	62.39	58.32
CDY21060	Canola	nucleus	59.68	58.11
PGSC0003DMT400004479	Potato	cytosol, plastid	58.33	56.67
OQU89636	Sorghum	plastid	47.07	56.49
CDY16526	Canola	cytosol	57.21	56.32
OQU80661	Sorghum	cytosol	37.61	56.04
GSMUA_Achr8P23440_001	Banana	nucleus	53.15	55.53
TraesCS5A01G246700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	55.41	55.28
HORVU5Hr1G069710.1	Barley	nucleus	55.41	54.91
TraesCS5B01G243700.1	Wheat	nucleus	55.41	54.91
GSMUA_Achr3P21250_001	Banana	cytosol, nucleus, plastid	56.08	54.85
Zm00001d020776_P002	Maize	cytosol, mitochondrion, nucleus, plastid	53.83	53.47
Os09t0466900-02	Rice	plastid	54.28	53.2
GSMUA_Achr3P21240_001	Banana	cytosol	19.59	52.73
Zm00001d031844_P001	Maize	plastid	48.87	46.47
Zm00001d029398_P001	Maize	cytosol, plasma membrane, plastid	22.3	46.26
KRH34471	Soybean	cytosol	25.9	42.59
KRH34157	Soybean	cytosol	24.77	40.15
KRG92624	Soybean	cytosol	24.77	40.15
KRH68799	Soybean	cytosol	25.0	39.36
KRH09150	Soybean	cytosol	31.98	27.41
KRH35387	Soybean	cytosol	26.8	25.59

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.6	UniProt:A0A0R0L9B5	EMBL:ACUP02001211	EnsemblPlantsGene:GLYMA_02G211400	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004683	GO:GO:0005488	GO:GO:0005515
GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009931	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	InterPro:IPR000719
EnsemblPlants:KRH72420	ProteinID:KRH72420	ProteinID:KRH72420.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF180	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233732E	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:39675173..39678485

Molecular Weight (calculated)

48776.6 Da

IEP (calculated)

8.167

GRAVY (calculated)

-0.318

Length

444 amino acids

Sequence
(BLAST)

001: MKKKRKESEA SGRSNLPDEI SKSHYSLERR SRLIKRCRED GVVATVPPSR GASLFLTPSR GLKRKIGCID KATQMGRSVR IEDDYVTGGS AIGQGKFGSV
101: TVCRARANGA EHACKTLRKG EETVHREVEI MQHLSGHPGV VTLEAVYEDE ECWHLVMELC SGGRLVDRMK EGPCSEHVAA GILKEVMLVV KYCHDMGVVH
201: RDIKPENILL TAAGKIKLAD FGLAIRISEG QNLTGVAGSP AYVAPEVLLG RYSEKVDIWS SGVLLHALLV GGLPFKGDSP EAVFEEIKNV KLDFQTGVWE
301: SISKPARDLV GRMLTRDVSA RITADEVLRH PWILFYTERT LKMLPVKSKL KLQNAAACQN ESGLVGGNKI VDDGSLDEDY SSPFSSSESC NSEYHEDCAW
401: IDALSTAVSR VRISETKRTK LWGSTSPLDQ QGSSNMKTNL CKAF

Best Arabidopsis Sequence Match ( AT1G12680.1 )
(BLAST)

001: MRKKRKGSET EGWENLPDDL SCSTASRSSN FRSHFSLEGY ARLKKRCKET EAVESVGSFK RRIAGVATAP PCGASSLVSS GRGLKRKIGC IDVSTQTGRK
101: NKIDDDYVFG RNIGKGKFGS VRICKSRKNG TEFACKTLKK GEETVHREVE IMQHLSGHPR VVTLHAVYEE SDCFHLVMEL CSGGRLIDQM VKVGRYSEQR
201: AANIFKDLML VINYCHEMGV VHRDIKPENI LLTAAGKIQL ADFGLAMRIA KGQTLSGLAG SPAYVAPEVL SENYSEKVDV WSAGVLLYAL LSGVLPFKGD
301: SLDAIFEAIK NVKLDFNTGV WESVSKPARD LLARMLTREE SARITADEVL RHPWILFYTD RTLKTMCIKS KHKSQAGSST CLQNRSPTEK TDLNRADREK
401: KIPSDSPTDS FSNTEEEEDE SGVVDVLVVA IANVRISEPK RSRVCSPTNN PIEQQHSSNL TSTSTLCRAF

Arabidopsis Description

PEPKR2Serine/threonine-protein kinase PEPKR2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W490]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.