CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34157	Soybean	cytosol	93.43	93.43
VIT_14s0036g00420.t01	Wine grape	cytosol	66.79	69.85
KRH68799	Soybean	cytosol	69.71	67.73
VIT_05s0049g00950.t01	Wine grape	cytosol	65.33	64.39
Solyc04g009910.2.1	Tomato	cytosol	63.14	62.45
Solyc04g009900.2.1	Tomato	cytosol	62.77	61.65
KRH34471	Soybean	cytosol	60.58	61.48
Solyc05g055050.1.1	Tomato	cytosol	43.43	58.62
GSMUA_AchrUn_...	Banana	cytosol	54.01	58.27
PGSC0003DMT400060165	Potato	mitochondrion	59.85	57.34
CDX95043	Canola	cytosol	59.85	57.14
AT1G08650.1	Thale cress	cytosol	59.12	57.04
CDX93546	Canola	cytosol	59.49	56.79
CDY46740	Canola	cytosol	57.66	55.83
Bra030737.1-P	Field mustard	cytosol	57.3	55.48
AT3G04530.1	Thale cress	cytosol	56.2	55.4
CDY68533	Canola	cytosol	56.93	55.12
CDY64699	Canola	cytosol	56.57	54.96
Bra040186.1-P	Field mustard	cytosol	56.2	54.61
CDY49329	Canola	cytosol	56.2	54.61
PGSC0003DMT400029962	Potato	cytosol	60.58	54.43
TraesCS6B01G413500.1	Wheat	cytosol	54.74	52.82
GSMUA_Achr4P21890_001	Banana	cytosol	53.65	52.69
HORVU4Hr1G045160.2	Barley	cytosol	53.65	52.69
TraesCS6A01G375800.1	Wheat	cytosol	54.38	52.46
TraesCS6D01G360800.1	Wheat	cytosol	54.38	52.46
GSMUA_Achr5P03930_001	Banana	cytosol	57.66	51.97
TraesCS6B01G413600.1	Wheat	cytosol	52.92	51.79
TraesCS6D01G360900.1	Wheat	cytosol	53.65	51.76
TraesCS6A01G375900.1	Wheat	cytosol	53.65	51.76
GSMUA_Achr2P12320_001	Banana	cytosol	54.38	51.2
Zm00001d018429_P001	Maize	cytosol	53.28	51.05
EES07722	Sorghum	cytosol	52.55	50.7
PGSC0003DMT400029874	Potato	cytosol	60.95	50.61
Os02t0807000-01	Rice	cytosol	52.92	50.17
HORVU6Hr1G067760.8	Barley	mitochondrion	34.67	49.22
TraesCS2D01G378100.1	Wheat	cytosol	51.46	48.79
Zm00001d003068_P001	Maize	cytosol	51.82	48.46
TraesCS2A01G381600.1	Wheat	cytosol	50.73	48.26
TraesCS2B01G398900.1	Wheat	cytosol	50.73	47.93
EES11118	Sorghum	cytosol	52.19	47.83
Os02t0625300-00	Rice	cytosol	51.82	46.56
TraesCS6B01G257800.1	Wheat	cytosol	49.27	46.55
TraesCS6D01G211900.1	Wheat	cytosol	49.27	46.55
TraesCS6A01G223500.1	Wheat	cytosol	49.27	46.55
Zm00001d051156_P001	Maize	cytosol	50.37	46.31
GSMUA_Achr5P03940_001	Banana	cytosol	52.55	45.71
HORVU5Hr1G037500.1	Barley	plastid	41.97	45.28
EES05452	Sorghum	cytosol	49.63	44.3
HORVU6Hr1G058780.1	Barley	cytosol	48.18	44.3
Zm00001d017270_P001	Maize	cytosol	49.63	43.73
GSMUA_Achr4P28690_001	Banana	cytosol	52.92	41.43
Bra018609.1-P	Field mustard	cytosol	57.3	40.36
Os04t0517500-01	Rice	cytosol	32.85	38.79
KRH72420	Soybean	cytosol	40.15	24.77
KRH16808	Soybean	cytosol	39.05	23.94
KRH09150	Soybean	cytosol	44.89	23.75
KRH62273	Soybean	nucleus	40.15	23.55
KRH52988	Soybean	nucleus	39.42	23.13
KRH35387	Soybean	cytosol	34.31	20.22

Protein Annotations

Gene3D:1.10.510.10	MapMan:1.4.1.2	MapMan:18.4.5.7	Gene3D:3.30.200.20	EntrezGene:547707	ProteinID:AAQ81581.1
EMBL:ACUP02012764	EMBL:AY143660	EnsemblPlantsGene:GLYMA_20G222600	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004683	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009931	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	InterPro:IPR000719	EnsemblPlants:KRG92624	ProteinID:KRG92624
ProteinID:KRG92624.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF76	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q8H1P3
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00000ADA52	:	:

Description

hypothetical protein

Coordinates

chr20:-:45730009..45731320

Molecular Weight (calculated)

31018.2 Da

IEP (calculated)

6.580

GRAVY (calculated)

-0.103

Length

274 amino acids

Sequence
(BLAST)

001: MWSALKRNYE VSEEIGRGRF GTIFRCFHPL SNQPYACKLI DKSLLLDSTD RHCLQNEPKF MSLLSPHPNI LQIFHVFEDD HYLSIVMDLC QPHTLFDRML
101: HAPFSESQAA SLIKNLLEAV AHCHRLGVAH RDIKPDNILF DSADNLKLAD FGSAEWFGDG RSMSGVVGTP YYVAPEVLLG REYDEKVDVW SCGVILYIML
201: AGIPPFYGDS AAEIFEAVVR ANLRFPSRIF RTVSPAAKDL LRKMISRDSS RRFSAEQALR HPWILSAGDT AELT

Best Arabidopsis Sequence Match ( AT1G08650.1 )
(BLAST)

001: MTCSQTLGNN NTNKYQICEE IGRGRFGTVS RVYAPATGDF FACKTIDKAS LSDDLDRACL DNEPKLMALL SYHPNIVQIH DLIDTDSTLS IFMELVHPSV
101: SIYDRLVSSG TFFEPQTASF AKQILQALSH CHRYGVVHRD IKPENILVDL RNDTVKICDF GSGIWLGEGE TTEGVVGTPY YVAPEVLMGY SYGEKVDLWS
201: AGVVLYTMLA GTPPFYGETA EEIFEAVLRG NLRFPTKIFR GVSSMAKDFL RKLICKDASR RFSAEQALRH PWIQRAGETE ERFI

Arabidopsis Description

PPCK1Phosphoenolpyruvate carboxylase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.