Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G360900.1 | Wheat | cytosol | 94.37 | 94.37 |
| TraesCS6A01G375800.1 | Wheat | cytosol | 93.66 | 93.66 |
| TraesCS6B01G413600.1 | Wheat | cytosol | 92.25 | 93.57 |
| HORVU4Hr1G045160.2 | Barley | cytosol | 88.03 | 89.61 |
| Os02t0807000-01 | Rice | cytosol | 81.34 | 79.93 |
| Zm00001d018429_P001 | Maize | cytosol | 77.82 | 77.27 |
| EES07722 | Sorghum | cytosol | 76.76 | 76.76 |
| HORVU5Hr1G037500.1 | Barley | plastid | 63.03 | 70.47 |
| HORVU6Hr1G067760.8 | Barley | mitochondrion | 47.54 | 69.95 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.04 | 63.78 |
| TraesCS2A01G381600.1 | Wheat | cytosol | 60.56 | 59.72 |
| GSMUA_Achr4P21890_001 | Banana | cytosol | 58.45 | 59.5 |
| GSMUA_Achr2P12320_001 | Banana | cytosol | 60.92 | 59.45 |
| TraesCS6A01G223500.1 | Wheat | cytosol | 58.8 | 57.59 |
| GSMUA_Achr5P03930_001 | Banana | cytosol | 60.92 | 56.91 |
| Solyc04g009910.2.1 | Tomato | cytosol | 55.28 | 56.68 |
| Solyc04g009900.2.1 | Tomato | cytosol | 55.63 | 56.63 |
| VIT_14s0036g00420.t01 | Wine grape | cytosol | 52.11 | 56.49 |
| KRH34471 | Soybean | cytosol | 53.17 | 55.93 |
| KRH34157 | Soybean | cytosol | 52.82 | 54.74 |
| Solyc06g053620.2.1 | Tomato | cytosol | 53.17 | 54.32 |
| PGSC0003DMT400042004 | Potato | cytosol | 53.17 | 54.32 |
| VIT_05s0049g00950.t01 | Wine grape | cytosol | 52.82 | 53.96 |
| KRG92624 | Soybean | cytosol | 51.76 | 53.65 |
| PGSC0003DMT400044221 | Potato | cytosol, mitochondrion | 52.11 | 53.05 |
| Solyc09g090090.1.1 | Tomato | cytosol | 52.46 | 52.28 |
| CDY64699 | Canola | cytosol | 51.41 | 51.77 |
| Bra040186.1-P | Field mustard | cytosol | 51.06 | 51.42 |
| CDY49329 | Canola | cytosol | 51.06 | 51.42 |
| AT3G04530.1 | Thale cress | cytosol | 49.3 | 50.36 |
| CDY68533 | Canola | cytosol | 50.0 | 50.18 |
| Bra030737.1-P | Field mustard | cytosol | 50.0 | 50.18 |
| CDX95043 | Canola | cytosol | 50.7 | 50.17 |
| PGSC0003DMT400029962 | Potato | cytosol | 53.87 | 50.16 |
| GSMUA_Achr5P03940_001 | Banana | cytosol | 55.63 | 50.16 |
| AT1G08650.1 | Thale cress | cytosol | 50.0 | 50.0 |
| PGSC0003DMT400060165 | Potato | mitochondrion | 50.0 | 49.65 |
| KRH68799 | Soybean | cytosol | 49.3 | 49.65 |
| CDX93546 | Canola | cytosol | 50.0 | 49.48 |
| CDY46740 | Canola | cytosol | 48.94 | 49.12 |
| GSMUA_Achr4P28690_001 | Banana | cytosol | 58.8 | 47.71 |
| Solyc05g055050.1.1 | Tomato | cytosol | 33.45 | 46.8 |
| PGSC0003DMT400029874 | Potato | cytosol | 53.52 | 46.06 |
| Bra018609.1-P | Field mustard | cytosol | 48.24 | 35.22 |
| TraesCS5A01G246700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 40.14 | 25.62 |
| TraesCS4A01G432300.1 | Wheat | cytosol | 43.66 | 23.98 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:1.4.1.2 | MapMan:18.4.5.7 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR24349 | PANTHER:PTHR24349:SF244 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 |
| SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS6A01G375900 | EnsemblPlants:TraesCS6A01G375900.1 | TIGR:cd05117 | SEG:seg |
Description
No Description!
Coordinates
chr6A:+:598024301..598025697
Molecular Weight (calculated)
30127.2 Da
IEP (calculated)
7.251
GRAVY (calculated)
0.039
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MVYGGEDALR QQYSIGDEIG RGRFGTVRRC HSNATGEALA LKTTPKAPLR DALDLALAEQ EPKLHLLVSS PPCSPHLVAL HAAFDDADAV HLVVDLCAGG
101: DLLSLLSARG GSLPEREAAG LAAQLASALA ACHRRGVAHR DVKPDNLLFD AATGALKLAD FGSAEWFGDG RRMSGLVGTP YYVAPEVVAG REYGEKVDVW
201: SAGVVLYVML SGTVPFYGAT APEIFEAVLR GNMRFPPRAF AGVSPGAKDL MRRMLCKDVA RRLSAEQVLR HPWITSCGGH AVAG
101: DLLSLLSARG GSLPEREAAG LAAQLASALA ACHRRGVAHR DVKPDNLLFD AATGALKLAD FGSAEWFGDG RRMSGLVGTP YYVAPEVVAG REYGEKVDVW
201: SAGVVLYVML SGTVPFYGAT APEIFEAVLR GNMRFPPRAF AGVSPGAKDL MRRMLCKDVA RRLSAEQVLR HPWITSCGGH AVAG
001: MTCSQTLGNN NTNKYQICEE IGRGRFGTVS RVYAPATGDF FACKTIDKAS LSDDLDRACL DNEPKLMALL SYHPNIVQIH DLIDTDSTLS IFMELVHPSV
101: SIYDRLVSSG TFFEPQTASF AKQILQALSH CHRYGVVHRD IKPENILVDL RNDTVKICDF GSGIWLGEGE TTEGVVGTPY YVAPEVLMGY SYGEKVDLWS
201: AGVVLYTMLA GTPPFYGETA EEIFEAVLRG NLRFPTKIFR GVSSMAKDFL RKLICKDASR RFSAEQALRH PWIQRAGETE ERFI
101: SIYDRLVSSG TFFEPQTASF AKQILQALSH CHRYGVVHRD IKPENILVDL RNDTVKICDF GSGIWLGEGE TTEGVVGTPY YVAPEVLMGY SYGEKVDLWS
201: AGVVLYTMLA GTPPFYGETA EEIFEAVLRG NLRFPTKIFR GVSSMAKDFL RKLICKDASR RFSAEQALRH PWIQRAGETE ERFI
Arabidopsis Description
PPCK1Phosphoenolpyruvate carboxylase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPK4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.