CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49329	Canola	cytosol	97.16	97.16
AT3G04530.1	Thale cress	cytosol	86.17	87.41
CDX93546	Canola	cytosol	65.96	64.81
CDX95043	Canola	cytosol	65.6	64.46
CDY46740	Canola	cytosol	64.18	63.96
CDY68533	Canola	cytosol	63.83	63.6
VIT_14s0036g00420.t01	Wine grape	cytosol	53.9	58.02
KRH34157	Soybean	cytosol	55.67	57.3
KRG92624	Soybean	cytosol	54.96	56.57
Solyc04g009910.2.1	Tomato	cytosol	54.61	55.6
Solyc04g009900.2.1	Tomato	cytosol	54.61	55.2
GSMUA_AchrUn_...	Banana	cytosol	48.58	53.94
KRH68799	Soybean	cytosol	53.9	53.9
VIT_05s0049g00950.t01	Wine grape	cytosol	52.13	52.88
TraesCS6B01G413600.1	Wheat	cytosol	52.13	52.5
TraesCS6D01G360900.1	Wheat	cytosol	52.13	51.76
TraesCS6D01G360800.1	Wheat	cytosol	52.13	51.76
TraesCS6B01G413500.1	Wheat	cytosol	52.13	51.76
GSMUA_Achr4P21890_001	Banana	cytosol	51.06	51.61
GSMUA_Achr2P12320_001	Banana	cytosol	53.19	51.55
TraesCS6A01G375900.1	Wheat	cytosol	51.77	51.41
Os02t0807000-01	Rice	cytosol	52.48	51.21
TraesCS6A01G375800.1	Wheat	cytosol	51.42	51.06
Solyc05g055050.1.1	Tomato	cytosol	36.17	50.25
HORVU4Hr1G045160.2	Barley	cytosol	49.65	50.18
Zm00001d018429_P001	Maize	cytosol	49.29	48.6
PGSC0003DMT400060165	Potato	mitochondrion	49.29	48.6
PGSC0003DMT400029962	Potato	cytosol	52.48	48.52
GSMUA_Achr5P03930_001	Banana	cytosol	51.77	48.03
EES07722	Sorghum	cytosol	48.23	47.89
Zm00001d003068_P001	Maize	cytosol	49.29	47.44
TraesCS2B01G398900.1	Wheat	cytosol	48.58	47.24
TraesCS2D01G378100.1	Wheat	cytosol	48.23	47.06
TraesCS2A01G381600.1	Wheat	cytosol	47.87	46.88
EES11118	Sorghum	cytosol	49.29	46.49
TraesCS6D01G211900.1	Wheat	cytosol	46.81	45.52
TraesCS6A01G223500.1	Wheat	cytosol	46.81	45.52
TraesCS6B01G257800.1	Wheat	cytosol	46.81	45.52
PGSC0003DMT400029874	Potato	cytosol	52.84	45.15
Zm00001d051156_P001	Maize	cytosol	46.81	44.3
Os02t0625300-00	Rice	cytosol	47.87	44.26
HORVU6Hr1G067760.8	Barley	mitochondrion	30.14	44.04
EES05452	Sorghum	cytosol	47.52	43.65
HORVU6Hr1G058780.1	Barley	cytosol	46.1	43.62
GSMUA_Achr5P03940_001	Banana	cytosol	47.87	42.86
Zm00001d017270_P001	Maize	cytosol	46.81	42.44
HORVU5Hr1G037500.1	Barley	plastid	37.59	41.73
GSMUA_Achr4P28690_001	Banana	cytosol	49.65	40.0
Os04t0517500-01	Rice	cytosol	29.79	36.21
CDY31273	Canola	cytosol	35.11	29.73
CDY16526	Canola	cytosol	37.94	23.73
CDY57079	Canola	cytosol	38.65	23.59
CDY21060	Canola	nucleus	37.94	23.46
CDX98048	Canola	cytosol	38.3	23.43
CDY26581	Canola	cytosol	37.59	22.36
CDY16025	Canola	cytosol	37.23	22.15
CDY16015	Canola	cytosol	39.01	21.48
CDY26573	Canola	cytosol	39.01	21.28
CDY58607	Canola	cytosol	38.65	20.84
CDY21058	Canola	cytosol	38.65	20.8

Protein Annotations

Gene3D:1.10.510.10	MapMan:1.4.1.2	MapMan:18.4.5.7	Gene3D:3.30.200.20	GO:A0A078JDH2	UniProt:A0A078JDH2
EnsemblPlants:CDY64699	ProteinID:CDY64699	ProteinID:CDY64699.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00042570001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24349	PANTHER:PTHR24349:SF76	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE73B4	:	:

Description

BnaCnng44550DBnaCnng44550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDH2]

Coordinates

chrLK034525:+:4792..5943

Molecular Weight (calculated)

31402.9 Da

IEP (calculated)

5.986

GRAVY (calculated)

-0.093

Length

282 amino acids

Sequence
(BLAST)

001: MTGEFELANS YQICDEIGRG RFGTITRCFS PATKEFYACK TIDKRVLVDA LDRECITTEP RIMAMLPPHP NIVMIHDLFE TEDTLAIVME LVDPPTTIYD
101: RLISAVGGRL SESESASYAR KLLRAVAHCH RRGVVHRDVK PDNVLIDLGS GGVKLCDFGS AVWLGGEKTE TAEGVVGTPY YLAPEVVMGR RYGEKVDVWS
201: VGVVIYTMLA GEPPFNGETA EEIFETILRG NLRFPRKVFG SVSAEAKDLL RRMICRDVSR RFSAEDALRH AWIVNVGNLQ SN

Best Arabidopsis Sequence Match ( AT3G04530.1 )
(BLAST)

001: MTREFELENN YQLCDEIGRG RFGTITRCFS PATKEFYACK TIDKRVLIDA LDRECIETEP RIMAMLPPHP NIIRIFDLYE TEDSLAIVME LVDPPMTIYD
101: RLISAGGRLS ESESASYAKQ ILSALAHCHR CDVVHRDVKP DNVLVDLVSG GVKLCDFGSA VWLGGETAEG VVGTPYYVAP EVVMGRKYDE KVDIWSAGVV
201: IYTMLAGEPP FNGETAEDIF ESILRGNLRF PPKKFGSVSS EAKDLLRKMI CRDVSRRFSA EDALRHSWMM NVGNLQSN

Arabidopsis Description

PPCK2Phosphoenolpyruvate carboxylase kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93VK0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.