Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12680.1 | CDX73678 | AT3G51920.1 | 17360592 |
| AT1G12680.1 | CDX95314 | AT3G51920.1 | 17360592 |
| AT1G12680.1 | CDY23174 | AT3G51920.1 | 17360592 |
| AT1G12680.1 | CDX92401 | AT5G21274.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31273 | Canola | cytosol | 62.53 | 84.68 |
| Bra019780.1-P | Field mustard | cytosol | 88.47 | 84.0 |
| CDX98048 | Canola | cytosol | 85.81 | 83.95 |
| CDY57079 | Canola | cytosol | 85.59 | 83.55 |
| CDY26581 | Canola | cytosol | 85.14 | 81.01 |
| CDY16025 | Canola | cytosol | 84.92 | 80.8 |
| AT1G12680.1 | Thale cress | cytosol | 82.93 | 79.57 |
| CDY21060 | Canola | nucleus | 78.71 | 77.85 |
| TraesCS5D01G252900.1 | Wheat | nucleus | 53.66 | 62.37 |
| KRH62273 | Soybean | nucleus | 63.86 | 61.67 |
| KRH52988 | Soybean | nucleus | 62.75 | 60.6 |
| VIT_18s0001g07070.t01 | Wine grape | cytosol | 62.75 | 60.47 |
| PGSC0003DMT400004479 | Potato | cytosol, plastid | 59.65 | 58.86 |
| GSMUA_Achr8P23440_001 | Banana | nucleus | 55.21 | 58.59 |
| OQU80661 | Sorghum | cytosol | 38.14 | 57.72 |
| KRH72420 | Soybean | cytosol | 56.32 | 57.21 |
| TraesCS5A01G246700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 55.65 | 56.4 |
| KRH16808 | Soybean | cytosol | 55.65 | 56.15 |
| TraesCS5B01G243700.1 | Wheat | nucleus | 55.65 | 56.03 |
| HORVU5Hr1G069710.1 | Barley | nucleus | 55.43 | 55.8 |
| GSMUA_Achr3P21250_001 | Banana | cytosol, nucleus, plastid | 56.1 | 55.73 |
| Os09t0466900-02 | Rice | plastid | 55.43 | 55.19 |
| Zm00001d020776_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 53.22 | 53.69 |
| OQU89636 | Sorghum | plastid | 43.9 | 53.51 |
| GSMUA_Achr3P21240_001 | Banana | cytosol | 18.18 | 49.7 |
| Zm00001d029398_P001 | Maize | cytosol, plasma membrane, plastid | 22.39 | 47.2 |
| Zm00001d031844_P001 | Maize | plastid | 48.12 | 46.47 |
| CDY49329 | Canola | cytosol | 23.95 | 38.3 |
| CDY64699 | Canola | cytosol | 23.73 | 37.94 |
| CDY46740 | Canola | cytosol | 23.28 | 37.1 |
| CDY68533 | Canola | cytosol | 22.84 | 36.4 |
| CDX95043 | Canola | cytosol | 22.84 | 35.89 |
| CDX93546 | Canola | cytosol | 22.62 | 35.54 |
| CDY16015 | Canola | cytosol | 32.82 | 28.91 |
| CDY26573 | Canola | cytosol | 32.82 | 28.63 |
| CDY58607 | Canola | cytosol | 32.82 | 28.3 |
| CDY21058 | Canola | cytosol | 32.82 | 28.24 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.5.6 | Gene3D:3.30.200.20 | GO:A0A078FU75 | UniProt:A0A078FU75 | EnsemblPlants:CDY16526 |
| ProteinID:CDY16526 | ProteinID:CDY16526.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00091137001 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24349 | PANTHER:PTHR24349:SF180 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EE4C7F | SEG:seg | : | : | : |
Description
BnaA08g02410DBnaA08g02410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FU75]
Coordinates
chrLK032064:+:716834..719077
Molecular Weight (calculated)
49526.6 Da
IEP (calculated)
8.158
GRAVY (calculated)
-0.243
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAIVGENMA KKRSRTTCSP DFKLLSQMIF IIPKKLKAGN GVDLETANGT GVEGERRLAG VATAPPCGAS SLVSSGRCLK RKIGCIDVST QTGRKNKIDD
101: DYVFGPNIGK GKFGSVRICR SKSNGIDFAC KTLKKGEETV HREVEIMQHL SGHPRVVTLH AVYEESDCFH LVMELCSGGR LIDQMVKEGR YSEQRAANIF
201: KDLMLVINYC HEMGVVHRDI KPENILLTAA GKIQLADFGL AMRIAKGQTL SGLAGSPAYV APEVLSESYS EKVDVWSAGV LLYALLSGVL PFKGDSLDAI
301: FEAIKKVKLD LNSGVWESVS KPARDLLSTM VTRDESARIT ADEVLRHPWI LFYTDRTLKT MCINPIKKTD VNRANREKKT TYDDSPTDSF SNTGEEEEDE
401: SGVVDVLVVA ISNVRISEPK RSRLCSPTNS PIEQQHSSNL TTTTNTLCRA F
101: DYVFGPNIGK GKFGSVRICR SKSNGIDFAC KTLKKGEETV HREVEIMQHL SGHPRVVTLH AVYEESDCFH LVMELCSGGR LIDQMVKEGR YSEQRAANIF
201: KDLMLVINYC HEMGVVHRDI KPENILLTAA GKIQLADFGL AMRIAKGQTL SGLAGSPAYV APEVLSESYS EKVDVWSAGV LLYALLSGVL PFKGDSLDAI
301: FEAIKKVKLD LNSGVWESVS KPARDLLSTM VTRDESARIT ADEVLRHPWI LFYTDRTLKT MCINPIKKTD VNRANREKKT TYDDSPTDSF SNTGEEEEDE
401: SGVVDVLVVA ISNVRISEPK RSRLCSPTNS PIEQQHSSNL TTTTNTLCRA F
001: MGMDIADKEN TSPLLFEFCN CYKVASLTET ILNPVNVSNL KDRYVLGEQL GWGQFGVIRV CSDKLTGERL ACKSISKDRL VTQDDMKSIK LEIAIMAKLA
101: GHPNVVNLKA VYEEKDSVHL VMELCAGGEL FHKLEKYGRY SEVRARVLFK HLMQVVKFCH DSGIVHRDLK PENILMATMS SSSPIKLADF GLATYIKPGE
201: KLSGTVGSPF YIAPEVLAGG YNQAADVWSA GVILYILLSG APPFWGKTKS KIFDAVRAAD LRFSAEPWDN ITSYAKDLIR GMLCVDPSQR LSADEVLAHS
301: WMEQLSESGQ EQYDQDGFGC EGLENGGCSF STQCVSREQD YSFSVGQLEQ STDNDFKSSF STFLPADNTL PNSGFDGFSF DGKQPESTTA GFSSTGIPSM
401: PSFTFFCTSP ARTQNNDITE IDGKVRDSSP KRLLPSPDSS SQLERRDEAG ENQTEAGGKS ETRRERGNWS RMSGLHSKRN RTIGLGELDQ LVVDVAVTES
501: IIRWASCTHI PTAPSLRLSL VC
101: GHPNVVNLKA VYEEKDSVHL VMELCAGGEL FHKLEKYGRY SEVRARVLFK HLMQVVKFCH DSGIVHRDLK PENILMATMS SSSPIKLADF GLATYIKPGE
201: KLSGTVGSPF YIAPEVLAGG YNQAADVWSA GVILYILLSG APPFWGKTKS KIFDAVRAAD LRFSAEPWDN ITSYAKDLIR GMLCVDPSQR LSADEVLAHS
301: WMEQLSESGQ EQYDQDGFGC EGLENGGCSF STQCVSREQD YSFSVGQLEQ STDNDFKSSF STFLPADNTL PNSGFDGFSF DGKQPESTTA GFSSTGIPSM
401: PSFTFFCTSP ARTQNNDITE IDGKVRDSSP KRLLPSPDSS SQLERRDEAG ENQTEAGGKS ETRRERGNWS RMSGLHSKRN RTIGLGELDQ LVVDVAVTES
501: IIRWASCTHI PTAPSLRLSL VC
Arabidopsis Description
PEPKR1PEPKR1 [Source:UniProtKB/TrEMBL;Acc:A0A178WE53]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.