CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93546	Canola	cytosol	98.26	98.26
CDY68533	Canola	cytosol	91.29	92.58
CDY46740	Canola	cytosol	89.55	90.81
AT1G08650.1	Thale cress	cytosol	89.55	90.49
Bra018609.1-P	Field mustard	cytosol	94.08	69.41
CDY64699	Canola	cytosol	64.46	65.6
CDY49329	Canola	cytosol	64.11	65.25
KRH34157	Soybean	cytosol	57.84	60.58
KRG92624	Soybean	cytosol	57.14	59.85
VIT_14s0036g00420.t01	Wine grape	cytosol	53.66	58.78
Solyc04g009910.2.1	Tomato	cytosol	53.31	55.23
Solyc04g009900.2.1	Tomato	cytosol	53.66	55.2
VIT_05s0049g00950.t01	Wine grape	cytosol	51.92	53.6
KRH68799	Soybean	cytosol	52.26	53.19
TraesCS6D01G360900.1	Wheat	cytosol	51.22	51.76
TraesCS6A01G375800.1	Wheat	cytosol	50.87	51.41
GSMUA_AchrUn_...	Banana	cytosol	45.3	51.18
TraesCS6B01G413600.1	Wheat	cytosol	49.83	51.07
TraesCS6D01G360800.1	Wheat	cytosol	50.52	51.06
Solyc05g055050.1.1	Tomato	cytosol	35.89	50.74
TraesCS6A01G375900.1	Wheat	cytosol	50.17	50.7
TraesCS6B01G413500.1	Wheat	cytosol	50.17	50.7
HORVU4Hr1G045160.2	Barley	cytosol	48.43	49.82
PGSC0003DMT400029962	Potato	cytosol	52.26	49.18
PGSC0003DMT400060165	Potato	mitochondrion	48.43	48.6
GSMUA_Achr2P12320_001	Banana	cytosol	49.13	48.45
Os02t0807000-01	Rice	cytosol	48.43	48.1
Zm00001d003068_P001	Maize	cytosol	48.43	47.44
Zm00001d018429_P001	Maize	cytosol	47.04	47.2
EES11118	Sorghum	cytosol	49.13	47.16
GSMUA_Achr4P21890_001	Banana	cytosol	45.64	46.95
EES07722	Sorghum	cytosol	46.34	46.83
TraesCS2D01G378100.1	Wheat	cytosol	47.04	46.71
TraesCS2B01G398900.1	Wheat	cytosol	46.69	46.21
HORVU6Hr1G067760.8	Barley	mitochondrion	31.01	46.11
TraesCS2A01G381600.1	Wheat	cytosol	45.99	45.83
TraesCS6A01G223500.1	Wheat	cytosol	45.99	45.52
TraesCS6B01G257800.1	Wheat	cytosol	45.99	45.52
PGSC0003DMT400029874	Potato	cytosol	52.26	45.45
GSMUA_Achr5P03930_001	Banana	cytosol	47.74	45.07
Zm00001d051156_P001	Maize	cytosol	46.69	44.97
TraesCS6D01G211900.1	Wheat	cytosol	45.3	44.83
Os02t0625300-00	Rice	cytosol	47.39	44.59
EES05452	Sorghum	cytosol	45.99	43.0
HORVU6Hr1G058780.1	Barley	cytosol	44.25	42.62
HORVU5Hr1G037500.1	Barley	plastid	36.59	41.34
Zm00001d017270_P001	Maize	cytosol	44.6	41.16
GSMUA_Achr5P03940_001	Banana	cytosol	43.9	40.0
GSMUA_Achr4P28690_001	Banana	cytosol	45.99	37.71
Os04t0517500-01	Rice	cytosol	29.62	36.64
CDY31273	Canola	cytosol	31.71	27.33
CDY16526	Canola	cytosol	35.89	22.84
CDY57079	Canola	cytosol	36.24	22.51
CDX98048	Canola	cytosol	35.89	22.34
CDY21060	Canola	nucleus	34.84	21.93
CDY26581	Canola	cytosol	35.89	21.73
CDY16025	Canola	cytosol	35.54	21.52
CDY16015	Canola	cytosol	36.93	20.7
CDY26573	Canola	cytosol	36.93	20.5
CDY58607	Canola	cytosol	36.93	20.27
CDY21058	Canola	cytosol	36.93	20.23

Protein Annotations

Gene3D:1.10.510.10	MapMan:1.4.1.2	MapMan:18.4.5.7	Gene3D:3.30.200.20	GO:A0A078E6S7	EnsemblPlants:CDX95043
ProteinID:CDX95043	ProteinID:CDX95043.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00100563001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24349	PANTHER:PTHR24349:SF76	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDC91D	SEG:seg	:	:	:

Description

BnaC05g06280D

Coordinates

chrLK031886:-:851503..853006

Molecular Weight (calculated)

32162.2 Da

IEP (calculated)

5.207

GRAVY (calculated)

-0.230

Length

287 amino acids

Sequence
(BLAST)

001: MTYSQTLGHN NNNNNEKYQI CEEIGRGRFG TVTRVYAPAT GEFYACKTIE KSSLTDDLDR ACIDNEPKLM ALLSFHPNIV QIHDLVDTDS TLSIYMELVD
101: PSVSIYDRLV SSGTFSESQT ASFAKQILQG LAHCHRYGVV HRDIKPENIL VDLRNDAVKI CDFGSGVWLG EGETTEGVVG TPYYVAPEVL MGYSYGEKVD
201: LWSVGVVLYT MLAGSPPFYG DTAEEIFEAV LRGNLRFPPK VFRGVSSMAK DFLRKMICKD ASRRFSAEQA LRHPWIQRAG EAEERFI

Best Arabidopsis Sequence Match ( AT1G08650.1 )
(BLAST)

001: MTCSQTLGNN NTNKYQICEE IGRGRFGTVS RVYAPATGDF FACKTIDKAS LSDDLDRACL DNEPKLMALL SYHPNIVQIH DLIDTDSTLS IFMELVHPSV
101: SIYDRLVSSG TFFEPQTASF AKQILQALSH CHRYGVVHRD IKPENILVDL RNDTVKICDF GSGIWLGEGE TTEGVVGTPY YVAPEVLMGY SYGEKVDLWS
201: AGVVLYTMLA GTPPFYGETA EEIFEAVLRG NLRFPTKIFR GVSSMAKDFL RKLICKDASR RFSAEQALRH PWIQRAGETE ERFI

Arabidopsis Description

PPCK1Phosphoenolpyruvate carboxylase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.